Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0005509
- Description
- calcium ion binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00003 | 3 | CH_atr_270 | 4 | 5 | 0.0002303 |
Capsella rubella | scaffold_1 | 5 | CH_cru_77 | 11 | 110 | 0.0003083 |
Capsella rubella | scaffold_1 | 6 | CH_cru_88 | 12 | 110 | 0.0000743861 |
Carica papaya | supercontig_49 | 1 | CH_cpa_87 | 6 | 16 | 0.0000429419 |
Carica papaya | supercontig_49 | 2 | CH_cpa_105 | 6 | 16 | 0.000054819 |
Carica papaya | supercontig_49 | 3 | CH_cpa_236 | 6 | 16 | 0.000149355 |
Chlamydomonas reinhardtii | chromosome_1 | 3 | CH_cre_112 | 7 | 27 | 0.000984384 |
Chlamydomonas reinhardtii | chromosome_1 | 6 | CH_cre_24 | 16 | 175 | 0.0000392394 |
Citrullus lanatus | Chr8 | 1 | CH_cla_24 | 9 | 10 | 0.0000000000000456066 |
Citrullus lanatus | Chr8 | 2 | CH_cla_30 | 9 | 10 | 0.000000000000052283 |
Citrullus lanatus | Chr8 | 3 | CH_cla_40 | 9 | 10 | 0.000000000000128883 |
Citrus sinensis | scaffold00002 | 1 | CH_csi_116 | 4 | 4 | 0.000180061 |
Citrus sinensis | scaffold00046 | 1 | CH_csi_18 | 10 | 14 | 0.000000000000155815 |
Citrus sinensis | scaffold00002 | 2 | CH_csi_148 | 4 | 4 | 0.000206134 |
Citrus sinensis | scaffold00046 | 2 | CH_csi_19 | 10 | 14 | 0.000000000000219502 |
Citrus sinensis | scaffold00002 | 3 | CH_csi_130 | 6 | 12 | 0.0000317151 |
Citrus sinensis | scaffold00046 | 3 | CH_csi_25 | 10 | 14 | 0.000000000000518654 |
Citrus sinensis | scaffold00046 | 4 | CH_csi_10 | 10 | 14 | 0.000000000000155815 |
Citrus sinensis | scaffold00046 | 5 | CH_csi_10 | 10 | 14 | 0.000000000000219502 |
Citrus sinensis | scaffold00046 | 6 | CH_csi_11 | 10 | 14 | 0.000000000000518654 |
Cucumis melo | CM3.5_scaffold00014 | 1 | CH_cme_26 | 10 | 15 | 0.0000000000000417548 |
Cucumis melo | CM3.5_scaffold00014 | 2 | CH_cme_26 | 10 | 15 | 0.0000000000000510954 |
Cucumis melo | CM3.5_scaffold00014 | 3 | CH_cme_29 | 11 | 15 | 5.48807e-16 |
Cucumis melo | CM3.5_scaffold00014 | 4 | CH_cme_13 | 10 | 15 | 0.0000000000000417548 |
Cucumis melo | CM3.5_scaffold00014 | 5 | CH_cme_11 | 10 | 15 | 0.0000000000000510954 |
Cucumis melo | CM3.5_scaffold00014 | 6 | CH_cme_17 | 11 | 15 | 5.48807e-16 |
Eucalyptus grandis | scaffold_6 | 1 | CH_egr_339 | 6 | 8 | 0.000000440897 |
Eucalyptus grandis | scaffold_8 | 1 | CH_egr_554 | 4 | 4 | 0.00020877 |
Eucalyptus grandis | scaffold_6 | 2 | CH_egr_442 | 6 | 8 | 0.000000505816 |
Eucalyptus grandis | scaffold_8 | 2 | CH_egr_704 | 4 | 4 | 0.000228776 |
Eucalyptus grandis | scaffold_3 | 3 | CH_egr_870 | 5 | 10 | 0.000860325 |
Eucalyptus grandis | scaffold_6 | 3 | CH_egr_520 | 6 | 8 | 0.000000979075 |
Eucalyptus grandis | scaffold_8 | 3 | CH_egr_820 | 4 | 4 | 0.000355273 |
Fragaria vesca | LG2 | 1 | CH_fve_228 | 4 | 5 | 0.00032713 |
Fragaria vesca | scf0513124 | 1 | CH_fve_71 | 9 | 30 | 0.00000000986545 |
Fragaria vesca | LG2 | 2 | CH_fve_299 | 4 | 5 | 0.000363818 |
Fragaria vesca | scf0513124 | 2 | CH_fve_82 | 9 | 30 | 0.0000000125262 |
Fragaria vesca | LG2 | 3 | CH_fve_398 | 4 | 5 | 0.00058634 |
Fragaria vesca | scf0513124 | 3 | CH_fve_84 | 10 | 30 | 0.00000000057767 |
Fragaria vesca | scf0513124 | 6 | CH_fve_31 | 10 | 30 | 0.00000000057767 |
Glycine max | Gm14 | 1 | CH_gma_107 | 7 | 10 | 0.0000000372071 |
Glycine max | Gm14 | 2 | CH_gma_128 | 7 | 10 | 0.0000000427067 |
Glycine max | Gm14 | 4 | CH_gma_70 | 10 | 79 | 0.000198862 |
Glycine max | Gm14 | 5 | CH_gma_80 | 10 | 79 | 0.000239651 |
Glycine max | Gm14 | 6 | CH_gma_116 | 10 | 79 | 0.000762485 |
Gossypium raimondii | Chr05 | 1 | CH_gra_143 | 5 | 5 | 0.00000321046 |
Gossypium raimondii | Chr09 | 1 | CH_gra_252 | 4 | 4 | 0.000332874 |
Gossypium raimondii | Chr10 | 1 | CH_gra_31 | 10 | 10 | 2.57064e-16 |
Gossypium raimondii | Chr05 | 2 | CH_gra_163 | 5 | 5 | 0.00000372729 |
Gossypium raimondii | Chr09 | 2 | CH_gra_309 | 4 | 4 | 0.000375034 |
Gossypium raimondii | Chr10 | 2 | CH_gra_30 | 10 | 10 | 3.47204e-16 |
Gossypium raimondii | Chr05 | 3 | CH_gra_197 | 5 | 5 | 0.00000657823 |
Gossypium raimondii | Chr10 | 3 | CH_gra_44 | 10 | 10 | 0.00000000000000108936 |
Gossypium raimondii | Chr10 | 4 | CH_gra_25 | 10 | 10 | 2.57064e-16 |
Gossypium raimondii | Chr10 | 5 | CH_gra_22 | 10 | 10 | 3.47204e-16 |
Gossypium raimondii | Chr10 | 6 | CH_gra_34 | 10 | 10 | 0.00000000000000108936 |
Manihot esculenta | scaffold02915 | 1 | CH_mes_80 | 5 | 6 | 0.0000120381 |
Manihot esculenta | scaffold05162 | 1 | CH_mes_41 | 6 | 6 | 0.00000001978 |
Manihot esculenta | scaffold02915 | 2 | CH_mes_92 | 5 | 6 | 0.0000135461 |
Manihot esculenta | scaffold05162 | 2 | CH_mes_43 | 6 | 6 | 0.0000000228024 |
Manihot esculenta | scaffold02915 | 3 | CH_mes_142 | 5 | 6 | 0.0000282765 |
Manihot esculenta | scaffold05162 | 3 | CH_mes_67 | 6 | 6 | 0.0000000553435 |
Medicago truncatula | chr1 | 1 | CH_mtr_98 | 10 | 28 | 0.00000000000392126 |
Medicago truncatula | chr3 | 1 | CH_mtr_368 | 7 | 36 | 0.0000242755 |
Medicago truncatula | chr3 | 1 | CH_mtr_258 | 6 | 11 | 0.000000318844 |
Medicago truncatula | chr5 | 1 | CH_mtr_521 | 4 | 6 | 0.000480427 |
Medicago truncatula | chr7 | 1 | CH_mtr_385 | 4 | 4 | 0.0000322705 |
Medicago truncatula | chr1 | 2 | CH_mtr_115 | 10 | 28 | 0.00000000000475905 |
Medicago truncatula | chr3 | 2 | CH_mtr_427 | 7 | 36 | 0.0000277451 |
Medicago truncatula | chr3 | 2 | CH_mtr_299 | 6 | 11 | 0.000000358035 |
Medicago truncatula | chr5 | 2 | CH_mtr_643 | 4 | 6 | 0.000518959 |
Medicago truncatula | chr7 | 2 | CH_mtr_456 | 4 | 4 | 0.0000348639 |
Medicago truncatula | chr1 | 3 | CH_mtr_113 | 11 | 28 | 0.000000000000187267 |
Medicago truncatula | chr3 | 3 | CH_mtr_396 | 6 | 11 | 0.00000086946 |
Medicago truncatula | chr3 | 3 | CH_mtr_600 | 7 | 36 | 0.0000770202 |
Medicago truncatula | chr5 | 3 | CH_mtr_892 | 4 | 6 | 0.000936846 |
Medicago truncatula | chr7 | 3 | CH_mtr_591 | 4 | 4 | 0.0000630154 |
Medicago truncatula | chr1 | 4 | CH_mtr_69 | 10 | 28 | 0.00000000000392126 |
Medicago truncatula | chr1 | 5 | CH_mtr_70 | 10 | 28 | 0.00000000000475905 |
Medicago truncatula | chr1 | 6 | CH_mtr_79 | 11 | 28 | 0.000000000000187267 |
Oryza sativa ssp. japonica | 8 | 1 | CH_osa_364 | 5 | 13 | 0.000498163 |
Oryza sativa ssp. japonica | 9 | 1 | CH_osa_298 | 6 | 21 | 0.000118552 |
Oryza sativa ssp. japonica | 8 | 2 | CH_osa_390 | 5 | 13 | 0.000544591 |
Oryza sativa ssp. japonica | 9 | 2 | CH_osa_312 | 6 | 21 | 0.000131884 |
Oryza sativa ssp. japonica | 1 | 3 | CH_osa_338 | 4 | 4 | 0.0000991477 |
Oryza sativa ssp. japonica | 2 | 3 | CH_osa_418 | 5 | 11 | 0.000285657 |
Oryza sativa ssp. japonica | 9 | 3 | CH_osa_388 | 6 | 21 | 0.000204897 |
Oryza sativa ssp. japonica | 9 | 4 | CH_osa_122 | 14 | 256 | 0.0000330751 |
Oryza sativa ssp. japonica | 9 | 5 | CH_osa_135 | 14 | 256 | 0.0000416602 |
Oryza sativa ssp. japonica | 9 | 6 | CH_osa_124 | 15 | 256 | 0.0000109102 |
Populus trichocarpa | Chr02 | 1 | CH_ptr_274 | 5 | 8 | 0.000107549 |
Populus trichocarpa | Chr14 | 1 | CH_ptr_190 | 6 | 9 | 0.00000138528 |
Populus trichocarpa | Chr19 | 1 | CH_ptr_90 | 10 | 23 | 0.0000000000923341 |
Populus trichocarpa | Chr02 | 2 | CH_ptr_329 | 5 | 8 | 0.000122126 |
Populus trichocarpa | Chr14 | 2 | CH_ptr_215 | 6 | 9 | 0.00000161404 |
Populus trichocarpa | Chr19 | 2 | CH_ptr_112 | 10 | 23 | 0.000000000119095 |
Populus trichocarpa | Chr02 | 3 | CH_ptr_458 | 5 | 8 | 0.000215079 |
Populus trichocarpa | Chr14 | 3 | CH_ptr_293 | 6 | 9 | 0.00000318756 |
Populus trichocarpa | Chr19 | 3 | CH_ptr_147 | 10 | 23 | 0.00000000036948 |
Populus trichocarpa | Chr19 | 4 | CH_ptr_53 | 10 | 23 | 0.0000000000923341 |
Populus trichocarpa | Chr19 | 5 | CH_ptr_58 | 10 | 23 | 0.000000000119095 |
Populus trichocarpa | Chr19 | 6 | CH_ptr_75 | 10 | 23 | 0.00000000036948 |
Prunus persica | scaffold_1 | 1 | CH_ppe_201 | 5 | 6 | 0.00000647317 |
Prunus persica | scaffold_1 | 1 | CH_ppe_36 | 9 | 9 | 0.00000000000000474377 |
Prunus persica | scaffold_1 | 2 | CH_ppe_228 | 5 | 6 | 0.00000720698 |
Prunus persica | scaffold_1 | 2 | CH_ppe_43 | 9 | 9 | 0.00000000000000576665 |
Prunus persica | scaffold_1 | 3 | CH_ppe_57 | 9 | 9 | 0.000000000000012539 |
Prunus persica | scaffold_1 | 3 | CH_ppe_290 | 5 | 6 | 0.0000110495 |
Prunus persica | scaffold_1 | 4 | CH_ppe_35 | 10 | 16 | 0.00000000000029226 |
Prunus persica | scaffold_1 | 5 | CH_ppe_33 | 10 | 16 | 0.000000000000362886 |
Prunus persica | scaffold_1 | 6 | CH_ppe_49 | 10 | 16 | 0.000000000000858154 |
Ricinus communis | 30170 | 1 | CH_rco_16 | 11 | 21 | 0.0000000000000856689 |
Ricinus communis | 30170 | 2 | CH_rco_17 | 11 | 21 | 0.000000000000125419 |
Ricinus communis | 30170 | 3 | CH_rco_22 | 12 | 21 | 0.00000000000000515792 |
Ricinus communis | 30170 | 4 | CH_rco_9 | 11 | 21 | 0.0000000000000856689 |
Ricinus communis | 30170 | 5 | CH_rco_8 | 11 | 21 | 0.000000000000125419 |
Ricinus communis | 30170 | 6 | CH_rco_11 | 12 | 21 | 0.00000000000000515792 |
Solanum tuberosum | chr06 | 1 | CH_stu_364 | 5 | 8 | 0.0000577517 |
Solanum tuberosum | chr11 | 1 | CH_stu_385 | 4 | 4 | 0.000134825 |
Solanum tuberosum | chr12 | 1 | CH_stu_386 | 4 | 4 | 0.000134825 |
Solanum tuberosum | chr06 | 2 | CH_stu_411 | 5 | 8 | 0.0000642805 |
Solanum tuberosum | chr11 | 2 | CH_stu_430 | 4 | 4 | 0.000146914 |
Solanum tuberosum | chr12 | 2 | CH_stu_431 | 4 | 4 | 0.000146914 |
Solanum tuberosum | chr06 | 3 | CH_stu_592 | 5 | 8 | 0.000126351 |
Solanum tuberosum | chr11 | 3 | CH_stu_664 | 4 | 4 | 0.000252633 |
Solanum tuberosum | chr12 | 3 | CH_stu_665 | 4 | 4 | 0.000252633 |
Solanum tuberosum | chr10 | 4 | CH_stu_139 | 11 | 118 | 0.000099127 |
Solanum tuberosum | chr10 | 5 | CH_stu_151 | 11 | 118 | 0.000123812 |
Solanum tuberosum | chr10 | 6 | CH_stu_224 | 11 | 118 | 0.000498842 |
Theobroma cacao | scaffold_8 | 1 | CH_tca_8 | 18 | 27 | 5.01326e-28 |
Theobroma cacao | scaffold_8 | 2 | CH_tca_8 | 18 | 27 | 9.64288e-28 |
Theobroma cacao | scaffold_8 | 3 | CH_tca_10 | 18 | 27 | 5.58939e-27 |
Theobroma cacao | scaffold_8 | 4 | CH_tca_7 | 18 | 27 | 5.01326e-28 |
Theobroma cacao | scaffold_8 | 5 | CH_tca_7 | 18 | 27 | 9.64288e-28 |
Theobroma cacao | scaffold_8 | 6 | CH_tca_13 | 18 | 27 | 5.58939e-27 |
Vitis vinifera | chr1 | 1 | CH_vvi_67 | 8 | 9 | 0.00000000000591777 |
Vitis vinifera | chr1 | 2 | CH_vvi_68 | 8 | 9 | 0.00000000000681925 |
Vitis vinifera | chr1 | 3 | CH_vvi_98 | 8 | 9 | 0.0000000000234365 |
Zea mays | 1 | 1 | CH_zma_20 | 14 | 56 | 0.00000000000125709 |
Zea mays | 1 | 2 | CH_zma_17 | 14 | 56 | 0.00000000000160763 |
Zea mays | 1 | 3 | CH_zma_31 | 14 | 56 | 0.0000000000218619 |
Zea mays | 1 | 4 | CH_zma_10 | 14 | 56 | 0.00000000000125709 |
Zea mays | 1 | 5 | CH_zma_12 | 14 | 56 | 0.00000000000160763 |
Zea mays | 1 | 6 | CH_zma_12 | 14 | 56 | 0.0000000000218619 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |