Functional clusters   top

Information

Type
GO term
Identifier
GO:0004525
Description
ribonuclease III activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000071CH_atr_103330.00000206148
Amborella trichopodascaffold000072CH_atr_107330.00000206148
Amborella trichopodascaffold000073CH_atr_161330.00000206148
Carica papayasupercontig_871CH_cpa_77350.0000169556
Carica papayasupercontig_872CH_cpa_92350.0000169556
Carica papayasupercontig_873CH_cpa_174350.0000642666
Chlamydomonas reinhardtiichromosome_161CH_cre_13440.00000000142463
Chlamydomonas reinhardtiichromosome_162CH_cre_11440.00000000142463
Chlamydomonas reinhardtiichromosome_163CH_cre_26440.0000000258376
Citrullus lanatusChr33CH_cla_149340.0000158161
Cucumis meloCM3.5_scaffold000063CH_cme_162330.00000492202
Eucalyptus grandisscaffold_61CH_egr_408340.00000585656
Eucalyptus grandisscaffold_62CH_egr_509340.00000585656
Eucalyptus grandisscaffold_63CH_egr_591340.00000745365
Gossypium raimondiiChr041CH_gra_171350.0000291002
Gossypium raimondiiChr042CH_gra_188350.0000291002
Gossypium raimondiiChr043CH_gra_229350.0000349188
Malus domestica113CH_mdo_113340.000000703115
Manihot esculentascaffold067111CH_mes_85340.0000196667
Manihot esculentascaffold067112CH_mes_98340.0000196667
Manihot esculentascaffold067113CH_mes_153340.000036736
Manihot esculentascaffold086863CH_mes_124330.00000918902
Medicago truncatulachr31CH_mtr_1545180.00000000190946
Medicago truncatulachr32CH_mtr_1855180.00000000190946
Medicago truncatulachr33CH_mtr_2475180.00000000457808
Prunus persicascaffold_31CH_ppe_198330.00000530037
Prunus persicascaffold_41CH_ppe_93440.00000000267474
Prunus persicascaffold_32CH_ppe_224330.00000530037
Prunus persicascaffold_42CH_ppe_111440.00000000267474
Prunus persicascaffold_33CH_ppe_279330.00000636045
Prunus persicascaffold_43CH_ppe_139440.00000000343895
Solanum lycopersicumch011CH_sly_609380.0000000000000966477
Solanum lycopersicumch011CH_sly_224466.94804e-54
Solanum lycopersicumch111CH_sly_306330.000109125
Solanum lycopersicumch012CH_sly_124466.94804e-54
Solanum lycopersicumch012CH_sly_639380.0000000000000966477
Solanum lycopersicumch112CH_sly_336330.000109125
Solanum lycopersicumch013CH_sly_7210390.00000000000000844789
Solanum lycopersicumch013CH_sly_130352.90335e-75
Solanum lycopersicumch113CH_sly_510330.000247463
Solanum lycopersicumch014CH_sly_2331291.62945e-64
Solanum lycopersicumch015CH_sly_2331291.62945e-64
Solanum lycopersicumch016CH_sly_1471292.17517e-97
Solanum lycopersicumch017CH_sly_35180.00000000873819
Solanum lycopersicumch107CH_sly_6340.0000234406
Solanum lycopersicumch018CH_sly_35180.00000000873819
Solanum lycopersicumch108CH_sly_6340.0000234406
Solanum lycopersicumch019CH_sly_116445.55745e-35
Solanum lycopersicumch109CH_sly_17340.000108705
Solanum lycopersicumch0112CH_sly_216445.55745e-35
Solanum tuberosumchr071CH_stu_312330.0000111824
Solanum tuberosumchr101CH_stu_157590.000000000526477
Solanum tuberosumchr111CH_stu_311330.0000111824
Solanum tuberosumchr072CH_stu_339330.0000111824
Solanum tuberosumchr102CH_stu_167590.000000000526477
Solanum tuberosumchr112CH_stu_338330.0000111824
Solanum tuberosumchr073CH_stu_495330.0000197394
Solanum tuberosumchr103CH_stu_246590.00000000141145
Solanum tuberosumchr113CH_stu_179550.0000000000112299
Zea mays53CH_zma_123330.0000025799

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V