Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0004497
- Description
- monooxygenase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 1 | CH_aly_172 | 4 | 10 | 0.000127871 |
Arabidopsis thaliana | 2 | 1 | CH_ath_219 | 4 | 4 | 0.0000401037 |
Arabidopsis thaliana | 3 | 1 | CH_ath_7 | 16 | 23 | 9.82403e-27 |
Arabidopsis thaliana | 3 | 1 | CH_ath_80 | 6 | 7 | 0.00000000936099 |
Arabidopsis thaliana | 5 | 1 | CH_ath_126 | 8 | 32 | 0.000000410676 |
Arabidopsis thaliana | 2 | 2 | CH_ath_284 | 4 | 4 | 0.0000657706 |
Arabidopsis thaliana | 3 | 2 | CH_ath_12 | 16 | 23 | 7.50176e-26 |
Arabidopsis thaliana | 3 | 2 | CH_ath_111 | 6 | 7 | 0.0000000197178 |
Arabidopsis thaliana | 5 | 2 | CH_ath_172 | 8 | 32 | 0.0000010969 |
Arabidopsis thaliana | 2 | 3 | CH_ath_299 | 4 | 4 | 0.0000693737 |
Arabidopsis thaliana | 3 | 3 | CH_ath_13 | 16 | 23 | 9.3355e-26 |
Arabidopsis thaliana | 3 | 3 | CH_ath_130 | 6 | 7 | 0.0000000213662 |
Arabidopsis thaliana | 5 | 3 | CH_ath_188 | 8 | 32 | 0.00000121922 |
Arabidopsis thaliana | 3 | 4 | CH_ath_6 | 16 | 23 | 9.82403e-27 |
Arabidopsis thaliana | 5 | 4 | CH_ath_56 | 11 | 122 | 0.00000630955 |
Arabidopsis thaliana | 3 | 5 | CH_ath_10 | 16 | 23 | 7.50176e-26 |
Arabidopsis thaliana | 5 | 5 | CH_ath_76 | 11 | 122 | 0.0000232637 |
Arabidopsis thaliana | 3 | 6 | CH_ath_10 | 16 | 23 | 9.3355e-26 |
Arabidopsis thaliana | 5 | 6 | CH_ath_63 | 12 | 122 | 0.00000160551 |
Beta vulgaris | Bvchr5.sca002 | 1 | CH_bvu_102 | 6 | 9 | 0.00000161867 |
Beta vulgaris | Bvchr5.sca023 | 1 | CH_bvu_88 | 6 | 8 | 0.000000544131 |
Beta vulgaris | Bvchr6.sca005 | 1 | CH_bvu_138 | 5 | 7 | 0.0000416462 |
Beta vulgaris | Bvchr7_un.sca001 | 1 | CH_bvu_20 | 10 | 13 | 0.0000000000000484054 |
Beta vulgaris | Bvchr8.sca017 | 1 | CH_bvu_98 | 8 | 24 | 0.00000119826 |
Beta vulgaris | Bvchr5.sca002 | 2 | CH_bvu_115 | 6 | 9 | 0.00000181626 |
Beta vulgaris | Bvchr6.sca005 | 2 | CH_bvu_165 | 5 | 7 | 0.000045835 |
Beta vulgaris | Bvchr7_un.sca001 | 2 | CH_bvu_22 | 10 | 13 | 0.0000000000000587782 |
Beta vulgaris | Bvchr5.sca002 | 3 | CH_bvu_144 | 6 | 9 | 0.00000186867 |
Beta vulgaris | Bvchr6.sca005 | 3 | CH_bvu_206 | 5 | 7 | 0.000046933 |
Beta vulgaris | Bvchr7_un.sca001 | 3 | CH_bvu_26 | 10 | 13 | 0.0000000000000616655 |
Beta vulgaris | Bvchr7_un.sca001 | 4 | CH_bvu_10 | 10 | 13 | 0.0000000000000484054 |
Beta vulgaris | Bvchr7_un.sca001 | 5 | CH_bvu_11 | 10 | 13 | 0.0000000000000587782 |
Beta vulgaris | Bvchr7_un.sca001 | 6 | CH_bvu_14 | 10 | 13 | 0.0000000000000616655 |
Carica papaya | supercontig_144 | 1 | CH_cpa_35 | 6 | 7 | 0.0000000460291 |
Carica papaya | supercontig_17 | 1 | CH_cpa_114 | 4 | 4 | 0.0000989505 |
Carica papaya | supercontig_189 | 1 | CH_cpa_113 | 4 | 4 | 0.0000989505 |
Carica papaya | supercontig_21 | 1 | CH_cpa_154 | 5 | 11 | 0.000359939 |
Carica papaya | supercontig_3 | 1 | CH_cpa_53 | 5 | 5 | 0.000000811857 |
Carica papaya | supercontig_33 | 1 | CH_cpa_28 | 8 | 16 | 0.0000000052583 |
Carica papaya | supercontig_6 | 1 | CH_cpa_17 | 8 | 9 | 0.00000000000386707 |
Carica papaya | supercontig_77 | 1 | CH_cpa_13 | 9 | 11 | 0.000000000000187966 |
Carica papaya | supercontig_85 | 1 | CH_cpa_16 | 9 | 12 | 0.000000000000746441 |
Carica papaya | supercontig_144 | 2 | CH_cpa_42 | 6 | 7 | 0.000000056631 |
Carica papaya | supercontig_17 | 2 | CH_cpa_146 | 4 | 4 | 0.000113542 |
Carica papaya | supercontig_3 | 2 | CH_cpa_62 | 5 | 5 | 0.000000964651 |
Carica papaya | supercontig_33 | 2 | CH_cpa_27 | 8 | 16 | 0.00000000693138 |
Carica papaya | supercontig_6 | 2 | CH_cpa_17 | 8 | 9 | 0.00000000000510681 |
Carica papaya | supercontig_85 | 2 | CH_cpa_16 | 9 | 12 | 0.00000000000102104 |
Carica papaya | supercontig_144 | 3 | CH_cpa_68 | 6 | 7 | 0.0000000647712 |
Carica papaya | supercontig_17 | 3 | CH_cpa_229 | 4 | 4 | 0.000124129 |
Carica papaya | supercontig_3 | 3 | CH_cpa_99 | 5 | 5 | 0.0000010787 |
Carica papaya | supercontig_33 | 3 | CH_cpa_44 | 8 | 16 | 0.00000000828948 |
Carica papaya | supercontig_6 | 3 | CH_cpa_27 | 8 | 9 | 0.00000000000611485 |
Carica papaya | supercontig_85 | 3 | CH_cpa_25 | 9 | 12 | 0.00000000000125074 |
Carica papaya | supercontig_6 | 4 | CH_cpa_10 | 15 | 128 | 0.00000000468716 |
Carica papaya | supercontig_6 | 5 | CH_cpa_9 | 15 | 128 | 0.00000000774229 |
Carica papaya | supercontig_6 | 6 | CH_cpa_16 | 15 | 128 | 0.0000000107084 |
Chlamydomonas reinhardtii | chromosome_10 | 3 | CH_cre_49 | 8 | 29 | 0.00002613 |
Chlamydomonas reinhardtii | chromosome_8 | 3 | CH_cre_55 | 6 | 12 | 0.0000471668 |
Citrus sinensis | scaffold00143 | 1 | CH_csi_78 | 4 | 5 | 0.00000581098 |
Citrus sinensis | scaffold00143 | 2 | CH_csi_106 | 4 | 5 | 0.0000447984 |
Citrus sinensis | scaffold00143 | 3 | CH_csi_137 | 4 | 5 | 0.0000470084 |
Cucumis melo | CM3.5_scaffold00033 | 3 | CH_cme_253 | 4 | 6 | 0.000129091 |
Eucalyptus grandis | scaffold_2 | 1 | CH_egr_190 | 6 | 7 | 0.0000000000374876 |
Eucalyptus grandis | scaffold_7 | 3 | CH_egr_420 | 7 | 13 | 0.0000000205437 |
Gossypium raimondii | Chr12 | 4 | CH_gra_29 | 12 | 69 | 0.0000000000000132058 |
Gossypium raimondii | Chr12 | 5 | CH_gra_31 | 14 | 83 | 0.000000000000599341 |
Oryza sativa ssp. japonica | 10 | 1 | CH_osa_22 | 11 | 25 | 6.58425e-19 |
Oryza sativa ssp. japonica | 10 | 2 | CH_osa_23 | 11 | 25 | 2.99148e-18 |
Oryza sativa ssp. japonica | 10 | 3 | CH_osa_35 | 11 | 25 | 1.04987e-17 |
Oryza sativa ssp. japonica | 10 | 4 | CH_osa_21 | 11 | 25 | 6.58425e-19 |
Oryza sativa ssp. japonica | 10 | 5 | CH_osa_21 | 11 | 25 | 2.99148e-18 |
Oryza sativa ssp. japonica | 10 | 6 | CH_osa_31 | 11 | 25 | 1.04987e-17 |
Oryza sativa ssp. japonica | 10 | 7 | CH_osa_5 | 8 | 25 | 0.0000000000000701737 |
Oryza sativa ssp. japonica | 10 | 8 | CH_osa_4 | 8 | 25 | 0.000000000000305152 |
Oryza sativa ssp. japonica | 10 | 9 | CH_osa_5 | 8 | 25 | 0.000000000000766181 |
Populus trichocarpa | Chr19 | 1 | CH_ptr_56 | 7 | 7 | 0.0000000000000313427 |
Populus trichocarpa | Chr19 | 2 | CH_ptr_90 | 7 | 7 | 0.00000000000274519 |
Populus trichocarpa | Chr19 | 3 | CH_ptr_107 | 7 | 7 | 0.00000000000305157 |
Prunus persica | scaffold_8 | 1 | CH_ppe_330 | 3 | 4 | 0.000910923 |
Ricinus communis | 29785 | 1 | CH_rco_105 | 6 | 8 | 0.00000279997 |
Ricinus communis | 29792 | 1 | CH_rco_197 | 4 | 4 | 0.000606126 |
Ricinus communis | 29815 | 1 | CH_rco_19 | 10 | 12 | 0.0000000000001794 |
Ricinus communis | 29910 | 1 | CH_rco_85 | 7 | 11 | 0.00000041649 |
Ricinus communis | 30120 | 1 | CH_rco_196 | 4 | 4 | 0.000606126 |
Ricinus communis | 30147 | 1 | CH_rco_34 | 8 | 9 | 0.000000000151213 |
Ricinus communis | 30148 | 1 | CH_rco_56 | 7 | 9 | 0.0000000464802 |
Ricinus communis | 30169 | 1 | CH_rco_17 | 12 | 21 | 0.000000000000118612 |
Ricinus communis | 30170 | 1 | CH_rco_84 | 7 | 11 | 0.00000041649 |
Ricinus communis | 30170 | 1 | CH_rco_5 | 15 | 18 | 7.0289e-22 |
Ricinus communis | 30174 | 1 | CH_rco_33 | 8 | 9 | 0.000000000151213 |
Ricinus communis | 29785 | 2 | CH_rco_117 | 6 | 8 | 0.00000319853 |
Ricinus communis | 29792 | 2 | CH_rco_234 | 4 | 4 | 0.000662365 |
Ricinus communis | 29815 | 2 | CH_rco_20 | 10 | 12 | 0.000000000000224395 |
Ricinus communis | 30120 | 2 | CH_rco_233 | 4 | 4 | 0.000662365 |
Ricinus communis | 30147 | 2 | CH_rco_37 | 8 | 9 | 0.000000000180768 |
Ricinus communis | 30148 | 2 | CH_rco_64 | 7 | 9 | 0.000000054307 |
Ricinus communis | 30169 | 2 | CH_rco_18 | 12 | 21 | 0.000000000000155029 |
Ricinus communis | 30174 | 2 | CH_rco_36 | 8 | 9 | 0.000000000180768 |
Ricinus communis | 29785 | 3 | CH_rco_153 | 6 | 8 | 0.00000356571 |
Ricinus communis | 29792 | 3 | CH_rco_295 | 4 | 4 | 0.000712147 |
Ricinus communis | 29815 | 3 | CH_rco_31 | 10 | 12 | 0.000000000000269382 |
Ricinus communis | 30120 | 3 | CH_rco_294 | 4 | 4 | 0.000712147 |
Ricinus communis | 30148 | 3 | CH_rco_100 | 7 | 9 | 0.0000000616661 |
Ricinus communis | 30169 | 3 | CH_rco_30 | 12 | 21 | 0.000000000000192901 |
Ricinus communis | 30174 | 3 | CH_rco_53 | 8 | 9 | 0.000000000209138 |
Ricinus communis | 29815 | 4 | CH_rco_11 | 10 | 12 | 0.0000000000001794 |
Ricinus communis | 29910 | 4 | CH_rco_21 | 10 | 40 | 0.0000016617 |
Ricinus communis | 30169 | 4 | CH_rco_10 | 12 | 21 | 0.000000000000118612 |
Ricinus communis | 30170 | 4 | CH_rco_5 | 15 | 18 | 7.0289e-22 |
Ricinus communis | 29815 | 5 | CH_rco_10 | 10 | 12 | 0.000000000000224395 |
Ricinus communis | 30169 | 5 | CH_rco_9 | 12 | 21 | 0.000000000000155029 |
Ricinus communis | 30170 | 5 | CH_rco_4 | 15 | 18 | 9.86427e-22 |
Ricinus communis | 29815 | 6 | CH_rco_16 | 10 | 12 | 0.000000000000269382 |
Ricinus communis | 30169 | 6 | CH_rco_15 | 12 | 21 | 0.000000000000192901 |
Ricinus communis | 30170 | 6 | CH_rco_5 | 15 | 18 | 1.3008e-21 |
Solanum tuberosum | chr03 | 1 | CH_stu_296 | 4 | 5 | 0.0000064424 |
Solanum tuberosum | chr03 | 2 | CH_stu_413 | 4 | 5 | 0.0000707136 |
Solanum tuberosum | chr03 | 3 | CH_stu_593 | 4 | 5 | 0.000133079 |
Theobroma cacao | scaffold_2 | 1 | CH_tca_164 | 4 | 6 | 0.00000231393 |
Theobroma cacao | scaffold_2 | 5 | CH_tca_82 | 10 | 178 | 0.000551783 |
Theobroma cacao | scaffold_2 | 6 | CH_tca_92 | 11 | 178 | 0.0000444718 |
Zea mays | 4 | 1 | CH_zma_95 | 4 | 7 | 0.00000525892 |
Zea mays | 4 | 2 | CH_zma_127 | 4 | 7 | 0.0000282222 |
Zea mays | 4 | 3 | CH_zma_207 | 4 | 7 | 0.0000634566 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0000254 | C-4 methylsterol oxidase activity | 4 |
GO:0004499 | N,N-dimethylaniline monooxygenase activity | 82 |
GO:0004500 | dopamine beta-monooxygenase activity | 5 |
GO:0004506 | squalene monooxygenase activity | 48 |
GO:0004508 | steroid 17-alpha-monooxygenase activity | 3 |
GO:0008398 | sterol 14-demethylase activity | 2 |
GO:0010012 | steroid 22-alpha hydroxylase activity | 2 |
GO:0010277 | chlorophyllide a oxygenase [overall] activity | 40 |
GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3 |
GO:0016710 | trans-cinnamate 4-monooxygenase activity | 8 |
GO:0018580 | nitronate monooxygenase activity | 12 |
GO:0046409 | p-coumarate 3-hydroxylase activity | 11 |
GO:0046424 | ferulate 5-hydroxylase activity | 4 |
GO:0051777 | ent-kaurenoate oxidase activity | 16 |
GO:0052722 | fatty acid in-chain hydroxylase activity | 8 |
GO:0072550 | triferuloylspermidine meta-hydroxylase activity | 3 |
GO:0080014 | thalianol hydroxylase activity | 2 |
GO:0080133 | midchain alkane hydroxylase activity | 48 |
GO:0097007 | 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity | 63 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |