Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0003333
- Description
- amino acid transmembrane transport
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00111 | 2 | CH_atr_118 | 3 | 3 | 0.0000076462 |
Amborella trichopoda | scaffold00111 | 3 | CH_atr_192 | 3 | 3 | 0.00000907987 |
Beta vulgaris | Bvchr5.sca009 | 1 | CH_bvu_85 | 4 | 7 | 0.000000288822 |
Beta vulgaris | Bvchr5.sca009 | 2 | CH_bvu_101 | 4 | 7 | 0.000000365798 |
Beta vulgaris | Bvchr5.sca009 | 3 | CH_bvu_126 | 4 | 7 | 0.000000457195 |
Eucalyptus grandis | scaffold_11 | 2 | CH_egr_693 | 3 | 5 | 0.00020764 |
Eucalyptus grandis | scaffold_11 | 3 | CH_egr_787 | 3 | 5 | 0.000253647 |
Glycine max | Gm10 | 2 | CH_gma_271 | 3 | 3 | 0.0000291398 |
Glycine max | Gm10 | 3 | CH_gma_347 | 3 | 3 | 0.000042765 |
Lotus japonicus | chr1 | 2 | CH_lja_18 | 4 | 4 | 0.00000000278943 |
Lotus japonicus | chr1 | 3 | CH_lja_25 | 4 | 4 | 0.0000000066682 |
Oryza sativa ssp. japonica | 1 | 2 | CH_osa_68 | 5 | 6 | 0.0000000000146849 |
Oryza sativa ssp. japonica | 3 | 2 | CH_osa_162 | 4 | 9 | 0.000000616265 |
Oryza sativa ssp. japonica | 1 | 3 | CH_osa_82 | 5 | 6 | 0.000000000017307 |
Oryza sativa ssp. japonica | 3 | 3 | CH_osa_185 | 4 | 9 | 0.000000701218 |
Populus trichocarpa | Chr01 | 3 | CH_ptr_453 | 3 | 4 | 0.000183515 |
Solanum tuberosum | chr05 | 2 | CH_stu_336 | 3 | 3 | 0.00000984051 |
Solanum tuberosum | chr05 | 3 | CH_stu_504 | 3 | 3 | 0.0000218543 |
Zea mays | 1 | 2 | CH_zma_48 | 4 | 5 | 0.0000000390495 |
Zea mays | 3 | 2 | CH_zma_198 | 3 | 6 | 0.000248211 |
Zea mays | 1 | 3 | CH_zma_73 | 4 | 5 | 0.0000000522642 |
Zea mays | 3 | 3 | CH_zma_279 | 3 | 6 | 0.000307577 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0034775 | glutathione transmembrane transport | 6 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |