Functional clusters: Arabidopsis thaliana
Tool for the visualization of the physical clustering of functionally related genes.
Chromosomal overview
Options
Data Overview
Experiments Overview
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal | Cluster count |
---|---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X | 363 |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X | 442 |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X | 468 |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X | 126 |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X | 158 |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X | 163 |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V | 41 |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V | 40 |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V | 41 |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V | 44 |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V | 42 |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V | 45 |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X | 589 |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X | 49 |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V | 20 |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X | 397 |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X | 99 |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V | 93 |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V | 38 |