View conserved binding sites


Gene
VV18G02350
Description
name=GSVIVG01008892001;
Alias
GSVIVG01008892001;GSVIVG01008892001;GSVIVT01008892001
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-1784
Matrix_109GBF3Not availableUpstream-1784
Upstream-1786
Matrix_233MYC3Not availableUpstream-1786
Matrix_300bZIP68;bZIP16Not availableUpstream-1785
Upstream-1786
Matrix_331GBF1Not availableUpstream-1784
Upstream-1786
Matrix_403BZR1Not availableUpstream-1783
Matrix_443AGL15Not availableUpstream-1783
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-19
Upstream-21
Upstream-23
Upstream-25
Upstream-27
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-975
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-78
Upstream-1093
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-21
Upstream-23
Upstream-25
Upstream-27
Upstream-29
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-21
Upstream-23
Upstream-25
Upstream-27
Upstream-29
Upstream-31
Upstream-33
Upstream-35