View conserved binding sites
- Gene
- VV16G05360
- Description
- name=GSVIVG01024337001;
- Alias
- GSVIVG01024337001;GSVIVG01024337001;GSVIVT01024337001
Binding site | Name | Description | Location | Position |
---|---|---|---|---|
Matrix_208 | AP1 | Not available | Downstream | 7788 |
Matrix_25 | AP3 | Not available | Upstream | -523 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -378 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -375 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -385 |