View conserved binding sites


Gene
VV14G09850
Description
name=GSVIVG01031267001;
Alias
GSVIVG01031267001;GSVIVG01031267001;GSVIVT01031267001
Binding siteNameDescriptionLocationPosition
Matrix_264ATAREB1Not availableUpstream-1107
Matrix_311TGA1Not availableUpstream-1023
Matrix_456bZIP60Not availableUpstream-1245
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-1023
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-854
Motif_285HDZIP2ATATHB2Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own geneUpstream-855
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-1022
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightDownstream4438
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-1021
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-1021
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-1935
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneDownstream4451