Matrix_104 | PI | Not available | Upstream | -262 |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -262 |
Matrix_109 | GBF3 | Not available | Upstream | -262 |
Matrix_113 | ABI5 | Not available | Upstream | -262 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -259 |
| | | Upstream | -260 |
Matrix_120 | BEE2 | Not available | Upstream | -263 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -262 |
| | | Upstream | -263 |
Matrix_128 | TGA2 | Not available | Upstream | -343 |
| | | Upstream | -1616 |
Matrix_129 | ABF1 | Not available | Upstream | -263 |
| | | Upstream | -1442 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -263 |
| | | Upstream | -264 |
Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -264 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -259 |
Matrix_156 | POC1 | Not available | Upstream | -262 |
| | | Upstream | -264 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -263 |
Matrix_214 | AP1 | Not available | Upstream | -261 |
Matrix_233 | MYC3 | Not available | Upstream | -264 |
Matrix_24 | POC1 | Not available | Upstream | -259 |
Matrix_247 | PIF3 | Not available | Upstream | -263 |
Matrix_264 | ATAREB1 | Not available | Upstream | -260 |
Matrix_296 | GBF2 | Not available | Upstream | -263 |
| | | Upstream | -264 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -263 |
| | | Upstream | -264 |
Matrix_301 | PIL5 | Not available | Upstream | -258 |
| | | Upstream | -264 |
Matrix_311 | TGA1 | Not available | Upstream | -343 |
Matrix_330 | MYC2;TT8 | Not available | Upstream | -263 |
Matrix_331 | GBF1 | Not available | Upstream | -262 |
Matrix_332 | SPT;ALC | Not available | Upstream | -263 |
| | | Upstream | -264 |
Matrix_345 | POC1 | Not available | Upstream | -259 |
| | | Upstream | -260 |
Matrix_389 | ILR3 | Not available | Upstream | -263 |
Matrix_403 | BZR1 | Not available | Upstream | -261 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -261 |
| | | Upstream | -263 |
Matrix_443 | AGL15 | Not available | Upstream | -261 |
Matrix_465 | MYC4 | Not available | Upstream | -263 |
Matrix_48 | PI | Not available | Upstream | -382 |
Matrix_480 | BES1 | Not available | Upstream | -262 |
| | | Upstream | -263 |
Matrix_488 | ABF1 | Not available | Upstream | -262 |
Matrix_53 | MYC3 | Not available | Upstream | -261 |
| | | Upstream | -265 |
Matrix_55 | PIF3 | Not available | Upstream | -262 |
Matrix_60 | AT1G01260;AT5G57150 | Not available | Upstream | -264 |
Matrix_64 | PIF5 | Not available | Upstream | -264 |
Matrix_7 | PIF4 | Not available | Upstream | -263 |
| | | Upstream | -265 |
Matrix_80 | BIM1 | Not available | Upstream | -262 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -264 |
Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -21 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -264 |
Motif_410 | ANAERO1CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator | Upstream | -165 |
Motif_441 | GAGA8HVBKN3 | GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR | Upstream | -374 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -263 |
| | | Upstream | -264 |
Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -747 |
| | | Upstream | -818 |
Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | Upstream | -1615 |
| | | Upstream | -1617 |
Motif_473 | ABREOSRGA1 | ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxia | Upstream | -263 |
Motif_563 | PYRIMIDINEBOXOSRAMY1A | Pyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this site | Upstream | -43 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -261 |
Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | Upstream | -1615 |
| | | Upstream | -1617 |
Motif_609 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -194 |
Motif_672 | AP2 | The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence element | Upstream | -194 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -375 |
| | | Upstream | -377 |
| | | Upstream | -379 |
| | | Upstream | -381 |
Motif_79 | UPRMOTIFIIAT | Motif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc | Upstream | -249 |