View conserved binding sites


Gene
VV07G09710
Description
name=GSVIVG01028174001;
Alias
GSVIVT01028174001;GSVIVG01028174001;GSVIVG01028174001
Binding siteNameDescriptionLocationPosition
Matrix_113ABI5Not availableUpstream-512
Matrix_122ABF1;AREB2Not availableUpstream-513
Matrix_129ABF1Not availableUpstream-568
Matrix_134ABF1Not availableUpstream-513
Matrix_153AP2Not availableUpstream-291
Matrix_178HSFB2ANot availableUpstream-557
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-571
Matrix_24POC1Not availableUpstream-216
Matrix_264ATAREB1Not availableUpstream-513
Matrix_300bZIP68;bZIP16Not availableUpstream-568
Matrix_320MYC4Not availableUpstream-512
Matrix_331GBF1Not availableUpstream-569
Matrix_438AtbZIP63Not availableUpstream-568
Matrix_456bZIP60Not availableUpstream-568
Matrix_480BES1Not availableUpstream-513
Matrix_488ABF1Not availableUpstream-576
Matrix_53MYC3Not availableUpstream-515
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-567
Matrix_7PIF4Not availableUpstream-513
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-511
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-531
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-554
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-534
Upstream-531
Motif_244ABRE-like binding site motifNot availableUpstream-568
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-531
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-566
Intron46
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-568
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-568
Motif_645BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-1579
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-510