View conserved binding sites


Gene
VV07G05030
Description
name=GSVIVG01022068001;
Alias
GSVIVT01022068001;GSVIVG01022068001;GSVIVG01022068001
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-130
Upstream-115
Matrix_110ATABI4;AT3G57600Not availableUpstream-129
Upstream-120
Matrix_119RRTF1Not availableUpstream-131
Matrix_138RRTF1Not availableUpstream-131
Matrix_146ORA47Not availableUpstream-130
Matrix_147ERF3;AT1G80580Not availableUpstream-130
Upstream-115
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-132
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-114
Matrix_190ATERF1Not availableUpstream-130
Upstream-129
Upstream-118
Upstream-117
Matrix_224ERF1Not availableUpstream-128
Upstream-116
Upstream-113
Matrix_234RAP2.3Not availableUpstream-130
Upstream-115
Matrix_252RAP2.6Not availableUpstream-130
Upstream-129
Upstream-127
Upstream-115
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-126
Upstream-117
Matrix_261ATERF-1Not availableUpstream-130
Upstream-115
Matrix_272DEAR4Not availableUpstream-130
Matrix_278AtbZIP44Not availableUpstream-126
Matrix_287ERF2Not availableUpstream-130
Upstream-115
Matrix_288RAP2.3Not availableUpstream-131
Matrix_295ERF1Not availableUpstream-130
Upstream-112
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-116
Matrix_334AT3G23230Not availableUpstream-129
Matrix_343AT2G33710Not availableUpstream-130
Upstream-115
Matrix_345POC1Not availableUpstream-129
Upstream-128
Matrix_355ERF10;ERF11Not availableUpstream-116
Matrix_360ORA59Not availableUpstream-130
Upstream-112
Matrix_363RAP2.3Not availableUpstream-131
Matrix_378ATERF1Not availableUpstream-130
Upstream-115
Matrix_406ATERF-7Not availableUpstream-117
Upstream-114
Matrix_409DEAR3Not availableUpstream-116
Matrix_418KNAT6;KNAT2Not availableUpstream-117
Matrix_426CRF1;CRF2Not availableUpstream-129
Matrix_45DRNNot availableUpstream-130
Upstream-115
Upstream-112
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-116
Matrix_462ATERF-8Not availableUpstream-117
Matrix_473RRTF1Not availableUpstream-130
Upstream-115
Matrix_484ATERF13Not availableUpstream-130
Upstream-112
Matrix_488ABF1Not availableUpstream-126
Matrix_493AT1G22985;AT1G71130Not availableUpstream-130
Upstream-115
Matrix_50ATERF14;AT5G43410Not availableUpstream-116
Matrix_506DRNL;ATERF-4Not availableUpstream-129
Upstream-114
Matrix_517ERF12Not availableUpstream-130
Upstream-127
Upstream-121
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-128
Upstream-116
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-129
Matrix_91CRF3Not availableUpstream-130
Upstream-115
Matrix_97APRR2Not availableUpstream-103
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-66
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-129
Upstream-111
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-111
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-124
Upstream-115
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightUpstream-125
Upstream-116
Motif_437ANAERO2CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1)Upstream-95
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-70