View conserved binding sites


Gene
VV06G12450
Description
name=GSVIVG01037523001;
Alias
GSVIVG01037523001;GSVIVG01037523001;GSVIVT01037523001
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-230
Matrix_109GBF3Not availableUpstream-230
Upstream-232
Matrix_113ABI5Not availableUpstream-232
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-227
Matrix_122ABF1;AREB2Not availableUpstream-231
Matrix_129ABF1Not availableUpstream-231
Matrix_134ABF1Not availableUpstream-232
Matrix_145GBF4;AT5G44080Not availableUpstream-232
Matrix_156POC1Not availableUpstream-230
Upstream-232
Matrix_186FHY3Not availableUpstream-120
Matrix_192FHY3/FAR1Not availableUpstream-232
Matrix_194HYH;HY5Not availableUpstream-228
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-231
Matrix_214AP1Not availableUpstream-229
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-232
Matrix_264ATAREB1Not availableUpstream-231
Matrix_300bZIP68;bZIP16Not availableUpstream-231
Upstream-232
Matrix_301PIL5Not availableUpstream-232
Matrix_331GBF1Not availableUpstream-230
Upstream-232
Matrix_332SPT;ALCNot availableUpstream-231
Upstream-232
Matrix_338AP2Not availableUpstream-228
Matrix_356PRR5Not availableUpstream-224
Matrix_389ILR3Not availableUpstream-231
Matrix_396AP3Not availableUpstream-88
Upstream-1054
Matrix_403BZR1Not availableUpstream-229
Matrix_443AGL15Not availableUpstream-229
Matrix_480BES1Not availableUpstream-231
Matrix_488ABF1Not availableUpstream-230
Matrix_55PIF3Not availableUpstream-230
Matrix_7PIF4Not availableUpstream-233
Matrix_77PRR5Not availableUpstream-230
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-232
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-231
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-231
Upstream-232
Motif_244ABRE-like binding site motifNot availableUpstream-230
Upstream-232
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-534
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-232
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-88
Upstream-1054
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-231
Upstream-232
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-233
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-233
Motif_638ABRE binding site motifNot availableUpstream-232
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-113