View conserved binding sites


Gene
VV06G07930
Description
name=GSVIVG01025505001;
Alias
GSVIVT01025505001;GSVIVG01025505001;GSVIVG01025505001
Binding siteNameDescriptionLocationPosition
Matrix_25AP3Not availableUpstream-565
Matrix_269FHY3/FAR1Not availableUpstream-739
Matrix_41anac058Not availableUpstream-755
Matrix_516ANAC038;ANAC079Not availableUpstream-753
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-49
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-553
Upstream-547
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-553
Upstream-547