Matrix_119 | RRTF1 | Not available | Upstream | -108 |
Matrix_138 | RRTF1 | Not available | Upstream | -108 |
Matrix_224 | ERF1 | Not available | Upstream | -108 |
Matrix_234 | RAP2.3 | Not available | Upstream | -107 |
Matrix_277 | RAP2.6 | Not available | Upstream | -108 |
Matrix_287 | ERF2 | Not available | Upstream | -107 |
Matrix_288 | RAP2.3 | Not available | Upstream | -108 |
Matrix_295 | ERF1 | Not available | Upstream | -107 |
Matrix_298 | RAV1 | Not available | Upstream | -113 |
Matrix_311 | TGA1 | Not available | Upstream | -319 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -108 |
Matrix_334 | AT3G23230 | Not available | Upstream | -106 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -108 |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | Upstream | -113 |
Matrix_360 | ORA59 | Not available | Upstream | -107 |
Matrix_363 | RAP2.3 | Not available | Upstream | -108 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -107 |
Matrix_378 | ATERF1 | Not available | Upstream | -107 |
Matrix_396 | AP3 | Not available | Upstream | -63 |
Matrix_399 | TGA1 | Not available | Upstream | -319 |
Matrix_406 | ATERF-7 | Not available | Upstream | -109 |
Matrix_412 | GL1 | Not available | Intron | 7717 |
Matrix_413 | RAV1 | Not available | Upstream | -113 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -320 |
Matrix_473 | RRTF1 | Not available | Upstream | -107 |
Matrix_484 | ATERF13 | Not available | Upstream | -107 |
Matrix_489 | RAV1 | Not available | Upstream | -111 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -108 |
Matrix_56 | BZIP17;BZIP28;BZIP49 | Not available | Upstream | -319 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -106 |
Motif_119 | ABI3 | Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | Intron | 5998 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -56 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -56 |
Motif_243 | TELOBOXATEEF1AA1 | telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristems | Upstream | -62 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -106 |
Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -106 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -56 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -318 |
Motif_358 | UP2ATMSD | Up2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -62 |
Motif_402 | AtTINY2 | Molecular cloning, phylogenetic analysis, expressional profiling and in vitro studies of TINY2 from Arabidopsis thaliana | Upstream | -108 |
Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -1810 |
Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | Upstream | -317 |
Motif_48 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -320 |
Motif_50 | AtERF-7;AtERF-4;AtERF-3;AtERF-1;AtERF-2;AtERF-5 | Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression. Role of an Arabidopsis AP2/EREBP-type transcriptional repressor in abscisic acid and drought stress responses | Upstream | -107 |
Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | Upstream | -317 |
Motif_88 | MYB2AT | Binding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis | Upstream | -56 |