View conserved binding sites


Gene
ST12G030950
Description
S-adenosylmethionine synthase (AHRD V1 ***- B8LFH4_IPOBA); contains Interpro domain(s) IPR002133 S-adenosylmethionine synthetase
Alias
gene:Sotub12g030950;Sotub12g030950.1.1;Sotub12g030950;Sotub12g030950.1.1
Binding siteNameDescriptionLocationPosition
Matrix_244DREB2CNot availableUpstream-1166
Matrix_394DREB_UNot availableUpstream-1166
Matrix_414AGL15Not availableUpstream-916
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-1166
Matrix_48PINot availableUpstream-915
Matrix_92AT1G33760Not availableUpstream-1166
Motif_370TATABOX2TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationUpstream-1351
Upstream-1692
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-930
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-930