View conserved binding sites


Gene
ST11G015360
Description
TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ); contains Interpro domain(s) IPR005333 Transcription factor, TCP
Alias
gene:Sotub11g015360;Sotub11g015360.1.1;Sotub11g015360;Sotub11g015360.1.1
Binding siteNameDescriptionLocationPosition
Matrix_196TCP20;AT5G41030Not availableUpstream-325
Matrix_25AP3Not availableUpstream-282
Matrix_269FHY3/FAR1Not availableUpstream-291
Matrix_39AP1Not availableUpstream-285
Matrix_42AT2G45680Not availableUpstream-327
Matrix_48PINot availableUpstream-285
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-296
Motif_346SND1;VND6;VND7;NST1;NST2Global analysis of direct targets of secondary wall NAC master switches in ArabidopsisUpstream-275
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-297
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-611