View conserved binding sites


Gene
ST10G028170
Description
Palmitoyltransferase PFA4 (AHRD V1 ***- B6TA04_MAIZE); contains Interpro domain(s) IPR001594 Zinc finger, DHHC-type
Alias
gene:Sotub10g028170;Sotub10g028170.1.1;Sotub10g028170;Sotub10g028170.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-64
Upstream-62
Matrix_119RRTF1Not availableUpstream-31
Matrix_147ERF3;AT1G80580Not availableUpstream-62
Matrix_151ASIL1Not availableUpstream-63
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-63
Upstream-61
Matrix_190ATERF1Not availableUpstream-62
Matrix_252RAP2.6Not availableUpstream-62
Matrix_287ERF2Not availableUpstream-64
Matrix_343AT2G33710Not availableUpstream-62
Matrix_344ATERF15;AT4G18450Not availableUpstream-62
Matrix_374AT5G07580;AT5G61590Not availableUpstream-63
Upstream-62
Matrix_406ATERF-7Not availableUpstream-64
Upstream-62
Matrix_433ATERF1Not availableUpstream-63
Matrix_448ATERF6Not availableUpstream-63
Matrix_45DRNNot availableUpstream-62
Matrix_462ATERF-8Not availableUpstream-64
Upstream-62
Matrix_484ATERF13Not availableUpstream-62
Matrix_5AT5G51190;ERF104Not availableUpstream-62
Matrix_517ERF12Not availableUpstream-62
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisIntron2503
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Intron2502
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionIntron2504