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BLAST
WorkbenchView conserved binding sites
- Gene
- ST10G024470
- Description
- Ankyrin-repeat protein (AHRD V1 **-- A2CIR5_ORYSJ); contains Interpro domain(s) IPR002110 Ankyrin
- Alias
- gene:Sotub10g024470;Sotub10g024470.1.1;Sotub10g024470;Sotub10g024470.1.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_101 | ERF5 | Not available | Upstream | -350 |
| Matrix_138 | RRTF1 | Not available | Upstream | -351 |
| Matrix_146 | ORA47 | Not available | Upstream | -350 |
| Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -350 |
| Matrix_190 | ATERF1 | Not available | Upstream | -350 |
| Upstream | -349 | |||
| Matrix_224 | ERF1 | Not available | Upstream | -351 |
| Matrix_234 | RAP2.3 | Not available | Upstream | -350 |
| Upstream | -349 | |||
| Matrix_252 | RAP2.6 | Not available | Upstream | -350 |
| Matrix_261 | ATERF-1 | Not available | Upstream | -350 |
| Matrix_272 | DEAR4 | Not available | Upstream | -350 |
| Matrix_287 | ERF2 | Not available | Upstream | -350 |
| Matrix_288 | RAP2.3 | Not available | Upstream | -351 |
| Matrix_295 | ERF1 | Not available | Upstream | -350 |
| Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -351 |
| Matrix_334 | AT3G23230 | Not available | Upstream | -349 |
| Matrix_343 | AT2G33710 | Not available | Upstream | -350 |
| Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -350 |
| Matrix_355 | ERF10;ERF11 | Not available | Upstream | -351 |
| Matrix_360 | ORA59 | Not available | Upstream | -350 |
| Matrix_363 | RAP2.3 | Not available | Upstream | -351 |
| Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -350 |
| Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -350 |
| Matrix_378 | ATERF1 | Not available | Upstream | -350 |
| Matrix_406 | ATERF-7 | Not available | Upstream | -352 |
| Matrix_409 | DEAR3 | Not available | Upstream | -351 |
| Matrix_426 | CRF1;CRF2 | Not available | Upstream | -349 |
| Matrix_45 | DRN | Not available | Upstream | -350 |
| Matrix_462 | ATERF-8 | Not available | Upstream | -352 |
| Matrix_473 | RRTF1 | Not available | Upstream | -350 |
| Upstream | -349 | |||
| Matrix_484 | ATERF13 | Not available | Upstream | -350 |
| Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -350 |
| Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -351 |
| Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -349 |
| Matrix_517 | ERF12 | Not available | Upstream | -350 |
| Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -351 |
| Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -349 |
| Matrix_91 | CRF3 | Not available | Upstream | -350 |
| Motif_310 | ANAERO3CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curator | Upstream | -824 |
| Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -349 |