View conserved binding sites


Gene
ST10G009330
Description
Mitochondrial ornithine carrier protein (AHRD V1 **** B6K278_SCHJY); contains Interpro domain(s) IPR001993 Mitochondrial substrate carrier
Alias
gene:Sotub10g009330;Sotub10g009330.1.1;Sotub10g009330;Sotub10g009330.1.1
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-242
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Downstream3933
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGADownstream3944