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WorkbenchView conserved binding sites
- Gene
- ST10G005640
- Description
- Nudix hydrolase 2 (AHRD V1 **-- B6U183_MAIZE); contains Interpro domain(s) IPR000086 NUDIX hydrolase domain
- Alias
- gene:Sotub10g005640;Sotub10g005640.1.1;Sotub10g005640;Sotub10g005640.1.1
| Binding site | Name | Description | Location | Position |
|---|---|---|---|---|
| Matrix_277 | RAP2.6 | Not available | Upstream | -1485 |
| Matrix_295 | ERF1 | Not available | Upstream | -1486 |
| Matrix_406 | ATERF-7 | Not available | Upstream | -1486 |
| Matrix_484 | ATERF13 | Not available | Upstream | -1486 |
| Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -1485 |
| Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -1486 |
| Motif_320 | AGCBOXNPGLB | AGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC box | Upstream | -1485 |