View conserved binding sites


Gene
ST07G015190
Description
Short internode related sequence 7 (AHRD V1 **-- D2KC77_BRARP); contains Interpro domain(s) IPR007818 Protein of unknown function DUF702
Alias
gene:Sotub07g015190;Sotub07g015190.1.1;Sotub07g015190;Sotub07g015190.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-463
Matrix_119RRTF1Not availableUpstream-464
Matrix_138RRTF1Not availableUpstream-464
Matrix_146ORA47Not availableUpstream-463
Matrix_147ERF3;AT1G80580Not availableUpstream-463
Matrix_190ATERF1Not availableUpstream-463
Upstream-462
Matrix_224ERF1Not availableUpstream-464
Matrix_234RAP2.3Not availableUpstream-463
Upstream-462
Matrix_25AP3Not availableUpstream-544
Upstream-538
Matrix_252RAP2.6Not availableUpstream-463
Matrix_261ATERF-1Not availableUpstream-463
Matrix_272DEAR4Not availableUpstream-463
Matrix_277RAP2.6Not availableUpstream-464
Matrix_285DDF1Not availableUpstream-465
Matrix_287ERF2Not availableUpstream-463
Matrix_288RAP2.3Not availableUpstream-464
Matrix_295ERF1Not availableUpstream-463
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-464
Matrix_334AT3G23230Not availableUpstream-462
Matrix_343AT2G33710Not availableUpstream-463
Matrix_355ERF10;ERF11Not availableUpstream-464
Matrix_360ORA59Not availableUpstream-463
Matrix_363RAP2.3Not availableUpstream-464
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-463
Matrix_378ATERF1Not availableUpstream-463
Matrix_406ATERF-7Not availableUpstream-465
Matrix_409DEAR3Not availableUpstream-464
Matrix_426CRF1;CRF2Not availableUpstream-462
Matrix_45DRNNot availableUpstream-463
Matrix_462ATERF-8Not availableUpstream-465
Matrix_473RRTF1Not availableUpstream-463
Upstream-462
Matrix_48PINot availableUpstream-534
Matrix_484ATERF13Not availableUpstream-463
Matrix_488ABF1Not availableUpstream-335
Matrix_493AT1G22985;AT1G71130Not availableUpstream-463
Matrix_50ATERF14;AT5G43410Not availableUpstream-464
Matrix_506DRNL;ATERF-4Not availableUpstream-462
Matrix_517ERF12Not availableUpstream-463
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-464
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-462
Matrix_91CRF3Not availableUpstream-463
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-245
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-462
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationDownstream813
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-257
Motif_648ARE2ARE (antioxidant response element); antioxidant response element of mouse metallothionein-I (MT-I) gene; Consensus sequence of mouse MT-I and MT-II genes, and MT genes isolated from rat, hamster, human, sheep, chicken, Drosophila melanogaster, C. elegans; See ARE1Upstream-461