View conserved binding sites


Gene
ST06G019440
Description
Chloroplast photosystem II-associated protein (AHRD V1 ***- A8HPM5_CHLRE); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
Alias
gene:Sotub06g019440;Sotub06g019440.1.1;Sotub06g019440;Sotub06g019440.1.1
Binding siteNameDescriptionLocationPosition
Matrix_438AtbZIP63Not availableUpstream-218
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-214
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-1753
Upstream-1752
Upstream-1751
Upstream-1750
Upstream-1749
Upstream-1748
Upstream-1747
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-1754
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-1754