View conserved binding sites


Gene
ST05G026080
Description
Phytochrome B2 (AHRD V1 ***- Q9SWS6_SOLLC); contains Interpro domain(s) IPR012129 Phytochrome A/B/C/D/E
Alias
gene:Sotub05g026080;Sotub05g026080.1.1;Sotub05g026080;Sotub05g026080.1.1
Binding siteNameDescriptionLocationPosition
Matrix_246ARR10Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulatorsUpstream-601
Matrix_414AGL15Not availableUpstream-87
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-259
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-258
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-252
Motif_420SORLREP2ATone of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and all SORLIPs; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-408