View conserved binding sites


Gene
ST05G015710
Description
ATP-dependent DNA helicase Q4 (AHRD V1 **** E2BI65_9HYME); contains Interpro domain(s) IPR004589 DNA helicase, ATP-dependent, RecQ type
Alias
gene:Sotub05g015710;Sotub05g015710.1.1;Sotub05g015710;Sotub05g015710.1.1
Binding siteNameDescriptionLocationPosition
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-19
Motif_226E2F1OSPCNAre2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-50
Motif_372E2FATE2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expressionUpstream-51
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-54
Upstream-50
Motif_522E2FaThe E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plantsUpstream-53
Motif_663E2F binding site motif;E2F/DP BS in AtCDC6Not availableUpstream-50