View conserved binding sites


Gene
ST05G015250
Description
Two-component response regulator ARR11 (AHRD V1 ***- B6UC09_MAIZE); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver region
Alias
gene:Sotub05g015250;Sotub05g015250.1.1;Sotub05g015250;Sotub05g015250.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-242
Matrix_151ASIL1Not availableUpstream-243
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-241
Matrix_190ATERF1Not availableUpstream-242
Upstream-241
Matrix_224ERF1Not availableUpstream-240
Matrix_243RAP2.12;RAP2.2Not availableUpstream-241
Matrix_261ATERF-1Not availableUpstream-242
Matrix_272DEAR4Not availableUpstream-242
Matrix_287ERF2Not availableUpstream-242
Matrix_334AT3G23230Not availableUpstream-241
Matrix_343AT2G33710Not availableUpstream-242
Matrix_344ATERF15;AT4G18450Not availableUpstream-242
Matrix_355ERF10;ERF11Not availableUpstream-243
Matrix_360ORA59Not availableUpstream-239
Matrix_406ATERF-7Not availableUpstream-241
Matrix_433ATERF1Not availableUpstream-243
Matrix_448ATERF6Not availableUpstream-243
Matrix_493AT1G22985;AT1G71130Not availableUpstream-242
Matrix_5AT5G51190;ERF104Not availableUpstream-242
Upstream-239
Matrix_506DRNL;ATERF-4Not availableUpstream-241
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-241
Matrix_91CRF3Not availableUpstream-242
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-162
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-264
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-238
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-264
Motif_435E2FBNTRNRE2Fb found in the tobacco RNR (Ribonucleotide reductase) gene promoter; Binding site of tobacco E2F; Involved in upregulation of the promoter at G1/S transition; dE2F (distal reverse E2F element) important for regulating specific RNR1a gene expression in respsonse to UV-C irradiationUpstream-237
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-237
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-162