View conserved binding sites


Gene
ST05G009120
Description
2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 (AHRD V1 *--- OGFD2_XENTR); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunit
Alias
gene:Sotub05g009120;Sotub05g009120.1.1;Sotub05g009120;Sotub05g009120.1.1
Binding siteNameDescriptionLocationPosition
Matrix_396AP3Not availableUpstream-85
Upstream-136
Matrix_412GL1Not availableIntron3615
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneIntron3618
Motif_181IBOXCORENTI-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regionsIntron3618
Motif_243TELOBOXATEEF1AA1telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristemsUpstream-85
Upstream-136
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsIntron3619
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-484
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-86
Upstream-137