View conserved binding sites


Gene
ST02G030050
Description
GDP-L-galactose phosphorylase (AHRD V1 **-- D3JYW8_ACTDE)
Alias
gene:Sotub02g030050;Sotub02g030050.1.1;Sotub02g030050;Sotub02g030050.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-84
Upstream-85
Upstream-87
Upstream-88
Upstream-89
Upstream-90
Matrix_110ATABI4;AT3G57600Not availableUpstream-86
Matrix_115AGL15Not availableUpstream-94
Matrix_119RRTF1Not availableUpstream-85
Matrix_138RRTF1Not availableUpstream-85
Matrix_146ORA47Not availableUpstream-84
Matrix_147ERF3;AT1G80580Not availableUpstream-86
Upstream-89
Matrix_151ASIL1Not availableUpstream-88
Upstream-89
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Upstream-90
Upstream-91
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-141
Matrix_186FHY3Not availableUpstream-127
Matrix_190ATERF1Not availableUpstream-83
Upstream-86
Upstream-87
Matrix_224ERF1Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_229CDC5A cdc5+ homolog of a higher plant, Arabidopsis thalianaUpstream-124
Matrix_234RAP2.3Not availableUpstream-84
Upstream-87
Matrix_243RAP2.12;RAP2.2Not availableUpstream-85
Upstream-88
Matrix_25AP3Not availableUpstream-63
Matrix_252RAP2.6Not availableUpstream-84
Upstream-85
Upstream-87
Upstream-88
Matrix_261ATERF-1Not availableUpstream-85
Upstream-88
Matrix_272DEAR4Not availableUpstream-84
Matrix_287ERF2Not availableUpstream-84
Upstream-85
Upstream-87
Upstream-88
Upstream-89
Upstream-90
Matrix_288RAP2.3Not availableUpstream-85
Matrix_295ERF1Not availableUpstream-86
Matrix_321HRDNot availableUpstream-85
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_334AT3G23230Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_343AT2G33710Not availableUpstream-84
Upstream-85
Upstream-87
Upstream-88
Matrix_344ATERF15;AT4G18450Not availableUpstream-86
Upstream-87
Upstream-89
Upstream-90
Matrix_355ERF10;ERF11Not availableUpstream-85
Upstream-88
Matrix_360ORA59Not availableUpstream-86
Matrix_363RAP2.3Not availableUpstream-85
Matrix_374AT5G07580;AT5G61590Not availableUpstream-83
Upstream-85
Upstream-86
Upstream-87
Upstream-88
Upstream-89
Upstream-90
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_378ATERF1Not availableUpstream-84
Upstream-85
Upstream-87
Upstream-88
Matrix_38SPL14Not availableUpstream-163
Matrix_39AP1Not availableUpstream-63
Matrix_405DREB2CNot availableUpstream-83
Upstream-84
Upstream-116
Upstream-117
Matrix_406ATERF-7Not availableUpstream-86
Upstream-87
Upstream-89
Matrix_409DEAR3Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_426CRF1;CRF2Not availableUpstream-85
Matrix_433ATERF1Not availableUpstream-88
Matrix_448ATERF6Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_45DRNNot availableUpstream-86
Upstream-89
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-85
Upstream-86
Matrix_462ATERF-8Not availableUpstream-86
Upstream-87
Upstream-89
Matrix_473RRTF1Not availableUpstream-84
Upstream-87
Matrix_48PINot availableUpstream-65
Matrix_484ATERF13Not availableUpstream-86
Upstream-89
Matrix_490AtMYB77;ATMYB44Not availableUpstream-118
Upstream-119
Matrix_493AT1G22985;AT1G71130Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_5AT5G51190;ERF104Not availableUpstream-89
Upstream-90
Matrix_50ATERF14;AT5G43410Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_506DRNL;ATERF-4Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_517ERF12Not availableUpstream-86
Upstream-89
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-85
Upstream-88
Matrix_91CRF3Not availableUpstream-85
Upstream-86
Upstream-88
Upstream-89
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-174
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-118
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-144
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-87
Motif_361SORLREP4ATone of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; Common in circadian-regulated promoters; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-49
Motif_65BS1EGCCRBS1 (binding site 1) found in E. gunnii Cinnamoyl-CoA reductase (CCR) gene promoter; nuclear protein binding site; Required for vascular expressionUpstream-129