Matrix_101 | ERF5 | Not available | Upstream | -58 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -43 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_151 | ASIL1 | Not available | Upstream | -64 |
| | | Upstream | -65 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -66 |
| | | Upstream | -67 |
Matrix_190 | ATERF1 | Not available | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -62 |
| | | Upstream | -63 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -41 |
| | | Upstream | -220 |
Matrix_224 | ERF1 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_234 | RAP2.3 | Not available | Upstream | -60 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -66 |
| | | Upstream | -67 |
Matrix_252 | RAP2.6 | Not available | Upstream | -60 |
| | | Upstream | -63 |
Matrix_256 | IXR11;KNAT5;KNAT4;KNAT3 | Not available | Upstream | -59 |
Matrix_261 | ATERF-1 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_287 | ERF2 | Not available | Upstream | -58 |
| | | Upstream | -66 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -64 |
| | | Upstream | -65 |
Matrix_334 | AT3G23230 | Not available | Upstream | -66 |
| | | Upstream | -67 |
Matrix_343 | AT2G33710 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -59 |
| | | Upstream | -65 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -64 |
| | | Upstream | -65 |
Matrix_356 | PRR5 | Not available | Upstream | -220 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -66 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -65 |
Matrix_378 | ATERF1 | Not available | Upstream | -60 |
| | | Upstream | -61 |
Matrix_396 | AP3 | Not available | Intron | 191 |
Matrix_405 | DREB2C | Not available | Upstream | -59 |
| | | Upstream | -60 |
Matrix_406 | ATERF-7 | Not available | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
Matrix_409 | DEAR3 | Not available | Upstream | -64 |
Matrix_418 | KNAT6;KNAT2 | Not available | Upstream | -59 |
Matrix_433 | ATERF1 | Not available | Upstream | -64 |
| | | Upstream | -65 |
Matrix_438 | AtbZIP63 | Not available | Upstream | -223 |
Matrix_448 | ATERF6 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_45 | DRN | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_462 | ATERF-8 | Not available | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
Matrix_473 | RRTF1 | Not available | Upstream | -60 |
Matrix_484 | ATERF13 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -64 |
| | | Upstream | -65 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -66 |
| | | Upstream | -67 |
Matrix_517 | ERF12 | Not available | Upstream | -62 |
| | | Upstream | -65 |
Matrix_53 | MYC3 | Not available | Upstream | -42 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -64 |
Matrix_64 | PIF5 | Not available | Upstream | -45 |
Matrix_7 | PIF4 | Not available | Upstream | -44 |
Matrix_77 | PRR5 | Not available | Upstream | -42 |
Matrix_80 | BIM1 | Not available | Upstream | -43 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -66 |
Matrix_91 | CRF3 | Not available | Upstream | -65 |
| | | Upstream | -66 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -302 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -44 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -44 |
| | | Upstream | -243 |
Motif_223 | LTRE1HVBLT49 | LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGAC | Upstream | -121 |
Motif_353 | HEXAMERATH4 | hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | Upstream | -61 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -305 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -305 |
Motif_76 | SURE1STPAT21 | Sucrose Responsive Element (SURE); A motif conserved among genes regulated by sucrose; See also SURE2STPAT21; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potato | Upstream | -301 |
Motif_79 | UPRMOTIFIIAT | Motif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etc | Upstream | -209 |