View conserved binding sites


Gene
ST02G028990
Description
UV excision repair protein RAD23 (AHRD V1 **-- B6JX15_SCHJY); contains Interpro domain(s) IPR004806 UV excision repair protein Rad23
Alias
gene:Sotub02g028990;Sotub02g028990.1.1;Sotub02g028990;Sotub02g028990.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-58
Upstream-63
Upstream-64
Upstream-66
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-43
Matrix_147ERF3;AT1G80580Not availableUpstream-65
Upstream-66
Matrix_151ASIL1Not availableUpstream-64
Upstream-65
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-64
Upstream-65
Upstream-66
Upstream-67
Matrix_190ATERF1Not availableUpstream-59
Upstream-60
Upstream-62
Upstream-63
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-41
Upstream-220
Matrix_224ERF1Not availableUpstream-61
Upstream-62
Upstream-64
Upstream-65
Matrix_234RAP2.3Not availableUpstream-60
Matrix_243RAP2.12;RAP2.2Not availableUpstream-66
Upstream-67
Matrix_252RAP2.6Not availableUpstream-60
Upstream-63
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-59
Matrix_261ATERF-1Not availableUpstream-65
Upstream-66
Matrix_287ERF2Not availableUpstream-58
Upstream-66
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-64
Upstream-65
Matrix_334AT3G23230Not availableUpstream-66
Upstream-67
Matrix_343AT2G33710Not availableUpstream-60
Upstream-61
Upstream-63
Upstream-64
Upstream-66
Matrix_344ATERF15;AT4G18450Not availableUpstream-59
Upstream-65
Matrix_355ERF10;ERF11Not availableUpstream-64
Upstream-65
Matrix_356PRR5Not availableUpstream-220
Matrix_374AT5G07580;AT5G61590Not availableUpstream-64
Upstream-65
Upstream-66
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-65
Matrix_378ATERF1Not availableUpstream-60
Upstream-61
Matrix_396AP3Not availableIntron191
Matrix_405DREB2CNot availableUpstream-59
Upstream-60
Matrix_406ATERF-7Not availableUpstream-63
Upstream-64
Upstream-66
Matrix_409DEAR3Not availableUpstream-64
Matrix_418KNAT6;KNAT2Not availableUpstream-59
Matrix_433ATERF1Not availableUpstream-64
Upstream-65
Matrix_438AtbZIP63Not availableUpstream-223
Matrix_448ATERF6Not availableUpstream-58
Upstream-59
Upstream-64
Upstream-65
Matrix_45DRNNot availableUpstream-65
Upstream-66
Matrix_462ATERF-8Not availableUpstream-63
Upstream-64
Upstream-66
Matrix_473RRTF1Not availableUpstream-60
Matrix_484ATERF13Not availableUpstream-65
Upstream-66
Matrix_493AT1G22985;AT1G71130Not availableUpstream-65
Upstream-66
Matrix_5AT5G51190;ERF104Not availableUpstream-65
Upstream-66
Matrix_50ATERF14;AT5G43410Not availableUpstream-64
Upstream-65
Matrix_506DRNL;ATERF-4Not availableUpstream-66
Upstream-67
Matrix_517ERF12Not availableUpstream-62
Upstream-65
Matrix_53MYC3Not availableUpstream-42
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-64
Matrix_64PIF5Not availableUpstream-45
Matrix_7PIF4Not availableUpstream-44
Matrix_77PRR5Not availableUpstream-42
Matrix_80BIM1Not availableUpstream-43
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-66
Matrix_91CRF3Not availableUpstream-65
Upstream-66
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-302
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-44
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-44
Upstream-243
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-121
Motif_353HEXAMERATH4hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 geneUpstream-61
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-305
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-305
Motif_76SURE1STPAT21Sucrose Responsive Element (SURE); A motif conserved among genes regulated by sucrose; See also SURE2STPAT21; Found between -184 and -156 bp in the patatin (a major tuber protein) gene promoter of potatoUpstream-301
Motif_79UPRMOTIFIIATMotif II in the conserved UPR (unfolded protein response) cis-acting element in Arabidopsis genes coding for SAR1B, HSP-90, SBR-like, Ca-ATPase 4, CNX1, PDI, etcUpstream-209