View conserved binding sites


Gene
ST02G021490
Description
Microtubule associated protein (AHRD V1 *--* A8J2Q6_CHLRE); contains Interpro domain(s) IPR011989 Armadillo-like helical
Alias
gene:Sotub02g021490;Sotub02g021490.1.1;Sotub02g021490;Sotub02g021490.1.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-161
Matrix_147ERF3;AT1G80580Not availableUpstream-161
Upstream-162
Matrix_151ASIL1Not availableUpstream-160
Upstream-161
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-160
Upstream-161
Upstream-162
Upstream-163
Matrix_183BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-937
Matrix_186FHY3Not availableUpstream-936
Matrix_255cdf3Not availableIntron13679
Matrix_344ATERF15;AT4G18450Not availableUpstream-161
Upstream-162
Matrix_374AT5G07580;AT5G61590Not availableUpstream-160
Upstream-161
Matrix_406ATERF-7Not availableUpstream-159
Upstream-160
Matrix_414AGL15Not availableUpstream-246
Matrix_433ATERF1Not availableUpstream-160
Upstream-161
Matrix_448ATERF6Not availableUpstream-160
Upstream-161
Matrix_45DRNNot availableUpstream-161
Upstream-162
Matrix_46AT4G21895Not availableIntron7409
Matrix_462ATERF-8Not availableUpstream-159
Upstream-160
Matrix_476bHLH115;bHLH34Not availableUpstream-939
Matrix_48PINot availableUpstream-92
Upstream-93
Upstream-245
Upstream-246
Matrix_484ATERF13Not availableUpstream-161
Matrix_5AT5G51190;ERF104Not availableUpstream-161
Upstream-162
Matrix_50ATERF14;AT5G43410Not availableUpstream-160
Matrix_77PRR5Not availableUpstream-936
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-938
Motif_235C8GCARGATBinding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)Upstream-263
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-938
Motif_346SND1;VND6;VND7;NST1;NST2Global analysis of direct targets of secondary wall NAC master switches in ArabidopsisUpstream-264
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-364
Upstream-528
Upstream-578
Upstream-677
Upstream-907
Upstream-913
Motif_631MARARSARS element; Motif found in SAR (MAR)Upstream-266
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-288
Upstream-289
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-289
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-244