Matrix_101 | ERF5 | Not available | Upstream | -161 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -161 |
| | | Upstream | -162 |
Matrix_151 | ASIL1 | Not available | Upstream | -160 |
| | | Upstream | -161 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -160 |
| | | Upstream | -161 |
| | | Upstream | -162 |
| | | Upstream | -163 |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -937 |
Matrix_186 | FHY3 | Not available | Upstream | -936 |
Matrix_255 | cdf3 | Not available | Intron | 13679 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -161 |
| | | Upstream | -162 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -160 |
| | | Upstream | -161 |
Matrix_406 | ATERF-7 | Not available | Upstream | -159 |
| | | Upstream | -160 |
Matrix_414 | AGL15 | Not available | Upstream | -246 |
Matrix_433 | ATERF1 | Not available | Upstream | -160 |
| | | Upstream | -161 |
Matrix_448 | ATERF6 | Not available | Upstream | -160 |
| | | Upstream | -161 |
Matrix_45 | DRN | Not available | Upstream | -161 |
| | | Upstream | -162 |
Matrix_46 | AT4G21895 | Not available | Intron | 7409 |
Matrix_462 | ATERF-8 | Not available | Upstream | -159 |
| | | Upstream | -160 |
Matrix_476 | bHLH115;bHLH34 | Not available | Upstream | -939 |
Matrix_48 | PI | Not available | Upstream | -92 |
| | | Upstream | -93 |
| | | Upstream | -245 |
| | | Upstream | -246 |
Matrix_484 | ATERF13 | Not available | Upstream | -161 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -161 |
| | | Upstream | -162 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -160 |
Matrix_77 | PRR5 | Not available | Upstream | -936 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -938 |
Motif_235 | C8GCARGAT | Binding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15) | Upstream | -263 |
Motif_318 | CGCGBOXAT | CGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRs | Upstream | -938 |
Motif_346 | SND1;VND6;VND7;NST1;NST2 | Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis | Upstream | -264 |
Motif_375 | ERELEE4 | ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter region | Upstream | -364 |
| | | Upstream | -528 |
| | | Upstream | -578 |
| | | Upstream | -677 |
| | | Upstream | -907 |
| | | Upstream | -913 |
Motif_631 | MARARS | ARS element; Motif found in SAR (MAR) | Upstream | -266 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -288 |
| | | Upstream | -289 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -289 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -244 |