Matrix_101 | ERF5 | Not available | Upstream | -358 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -685 |
Matrix_119 | RRTF1 | Not available | Upstream | -359 |
Matrix_138 | RRTF1 | Not available | Upstream | -359 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -358 |
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -360 |
Matrix_224 | ERF1 | Not available | Upstream | -359 |
Matrix_234 | RAP2.3 | Not available | Upstream | -358 |
Matrix_261 | ATERF-1 | Not available | Upstream | -358 |
Matrix_287 | ERF2 | Not available | Upstream | -358 |
Matrix_288 | RAP2.3 | Not available | Upstream | -359 |
Matrix_295 | ERF1 | Not available | Upstream | -358 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -359 |
Matrix_334 | AT3G23230 | Not available | Upstream | -357 |
Matrix_343 | AT2G33710 | Not available | Upstream | -358 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -359 |
Matrix_360 | ORA59 | Not available | Upstream | -358 |
Matrix_363 | RAP2.3 | Not available | Upstream | -359 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -358 |
Matrix_378 | ATERF1 | Not available | Upstream | -358 |
Matrix_406 | ATERF-7 | Not available | Upstream | -360 |
Matrix_409 | DEAR3 | Not available | Upstream | -359 |
Matrix_414 | AGL15 | Not available | Upstream | -390 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -357 |
Matrix_45 | DRN | Not available | Upstream | -358 |
Matrix_462 | ATERF-8 | Not available | Upstream | -360 |
Matrix_473 | RRTF1 | Not available | Upstream | -358 |
Matrix_48 | PI | Not available | Upstream | -305 |
| | | Intron | 851 |
Matrix_484 | ATERF13 | Not available | Upstream | -358 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -358 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -359 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -357 |
Matrix_517 | ERF12 | Not available | Upstream | -358 |
Matrix_55 | PIF3 | Not available | Upstream | -682 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -357 |
Matrix_91 | CRF3 | Not available | Upstream | -358 |
Motif_104 | CAREOSREP1 | CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in rice | Upstream | -380 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -298 |
Motif_254 | MYB46;MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | Upstream | -62 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -357 |
Motif_321 | TATABOX5 | TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis | Upstream | -1554 |
Motif_342 | POLASIG1 | PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in Arabidopsis | Upstream | -1555 |
Motif_370 | TATABOX2 | TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation | Upstream | -1552 |
Motif_51 | MYB46 | Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesis | Upstream | -62 |
Motif_575 | TATABOX3 | TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene | Upstream | -1836 |
Motif_642 | SEF1MOTIF | SEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) gene | Upstream | -1558 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -394 |
| | | Upstream | -392 |
| | | Upstream | -390 |