View conserved binding sites


Gene
ST01G040070
Description
ATP-dependent RNA helicase DOB1 (AHRD V1 **** B0WF10_CULQU); contains Interpro domain(s) IPR016438 RNA helicase, ATP-dependent, SK12/DOB1
Alias
gene:Sotub01g040070;Sotub01g040070.1.1;Sotub01g040070;Sotub01g040070.1.1
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-225
Matrix_146ORA47Not availableUpstream-216
Matrix_147ERF3;AT1G80580Not availableUpstream-196
Upstream-216
Upstream-227
Upstream-228
Matrix_154AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130Not availableUpstream-225
Matrix_190ATERF1Not availableUpstream-198
Upstream-225
Upstream-226
Matrix_224ERF1Not availableUpstream-195
Upstream-227
Matrix_252RAP2.6Not availableUpstream-196
Matrix_261ATERF-1Not availableUpstream-196
Upstream-200
Upstream-216
Upstream-228
Matrix_295ERF1Not availableUpstream-227
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-195
Upstream-215
Upstream-227
Matrix_343AT2G33710Not availableUpstream-196
Upstream-198
Upstream-216
Upstream-224
Upstream-225
Upstream-228
Matrix_355ERF10;ERF11Not availableUpstream-195
Upstream-215
Upstream-227
Matrix_360ORA59Not availableUpstream-196
Upstream-227
Upstream-228
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-196
Upstream-216
Upstream-228
Matrix_378ATERF1Not availableUpstream-224
Matrix_406ATERF-7Not availableUpstream-225
Matrix_409DEAR3Not availableUpstream-199
Upstream-227
Matrix_426CRF1;CRF2Not availableUpstream-197
Upstream-229
Upstream-257
Matrix_45DRNNot availableUpstream-196
Upstream-216
Upstream-227
Upstream-228
Matrix_462ATERF-8Not availableUpstream-198
Upstream-214
Upstream-225
Upstream-226
Matrix_473RRTF1Not availableUpstream-224
Matrix_484ATERF13Not availableUpstream-196
Upstream-216
Upstream-227
Upstream-228
Matrix_493AT1G22985;AT1G71130Not availableUpstream-196
Upstream-216
Upstream-228
Matrix_506DRNL;ATERF-4Not availableUpstream-197
Upstream-217
Upstream-229
Upstream-257
Matrix_517ERF12Not availableUpstream-196
Upstream-227
Upstream-228
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-195
Upstream-227
Matrix_91CRF3Not availableUpstream-196
Upstream-216
Upstream-228
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-228