View conserved binding sites
- Gene
- ST01G040070
- Description
- ATP-dependent RNA helicase DOB1 (AHRD V1 **** B0WF10_CULQU); contains Interpro domain(s) IPR016438 RNA helicase, ATP-dependent, SK12/DOB1
- Alias
- gene:Sotub01g040070;Sotub01g040070.1.1;Sotub01g040070;Sotub01g040070.1.1
Binding site | Name | Description | Location | Position |
---|---|---|---|---|
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -225 |
Matrix_146 | ORA47 | Not available | Upstream | -216 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -227 | |||
Upstream | -228 | |||
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -225 |
Matrix_190 | ATERF1 | Not available | Upstream | -198 |
Upstream | -225 | |||
Upstream | -226 | |||
Matrix_224 | ERF1 | Not available | Upstream | -195 |
Upstream | -227 | |||
Matrix_252 | RAP2.6 | Not available | Upstream | -196 |
Matrix_261 | ATERF-1 | Not available | Upstream | -196 |
Upstream | -200 | |||
Upstream | -216 | |||
Upstream | -228 | |||
Matrix_295 | ERF1 | Not available | Upstream | -227 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -195 |
Upstream | -215 | |||
Upstream | -227 | |||
Matrix_343 | AT2G33710 | Not available | Upstream | -196 |
Upstream | -198 | |||
Upstream | -216 | |||
Upstream | -224 | |||
Upstream | -225 | |||
Upstream | -228 | |||
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -195 |
Upstream | -215 | |||
Upstream | -227 | |||
Matrix_360 | ORA59 | Not available | Upstream | -196 |
Upstream | -227 | |||
Upstream | -228 | |||
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -228 | |||
Matrix_378 | ATERF1 | Not available | Upstream | -224 |
Matrix_406 | ATERF-7 | Not available | Upstream | -225 |
Matrix_409 | DEAR3 | Not available | Upstream | -199 |
Upstream | -227 | |||
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -197 |
Upstream | -229 | |||
Upstream | -257 | |||
Matrix_45 | DRN | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -227 | |||
Upstream | -228 | |||
Matrix_462 | ATERF-8 | Not available | Upstream | -198 |
Upstream | -214 | |||
Upstream | -225 | |||
Upstream | -226 | |||
Matrix_473 | RRTF1 | Not available | Upstream | -224 |
Matrix_484 | ATERF13 | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -227 | |||
Upstream | -228 | |||
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -228 | |||
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -197 |
Upstream | -217 | |||
Upstream | -229 | |||
Upstream | -257 | |||
Matrix_517 | ERF12 | Not available | Upstream | -196 |
Upstream | -227 | |||
Upstream | -228 | |||
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -195 |
Upstream | -227 | |||
Matrix_91 | CRF3 | Not available | Upstream | -196 |
Upstream | -216 | |||
Upstream | -228 | |||
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -228 |