Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -53 |
| | | Upstream | -56 |
Matrix_138 | RRTF1 | Not available | Upstream | -54 |
| | | Upstream | -124 |
Matrix_146 | ORA47 | Not available | Upstream | -55 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -51 |
Matrix_151 | ASIL1 | Not available | Upstream | -50 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -52 |
Matrix_224 | ERF1 | Not available | Upstream | -50 |
Matrix_256 | IXR11;KNAT5;KNAT4;KNAT3 | Not available | Upstream | -49 |
Matrix_261 | ATERF-1 | Not available | Upstream | -51 |
Matrix_272 | DEAR4 | Not available | Upstream | -55 |
Matrix_285 | DDF1 | Not available | Upstream | -28 |
Matrix_292 | FTQ4 | Not available | Upstream | -29 |
Matrix_308 | INO | Not available | Upstream | -48 |
Matrix_312 | ARF11;MP;ARF6;IAA21;ARF8;ARF4 | Not available | Upstream | -28 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -50 |
| | | Upstream | -51 |
| | | Upstream | -54 |
| | | Upstream | -124 |
Matrix_343 | AT2G33710 | Not available | Upstream | -52 |
| | | Upstream | -55 |
| | | Upstream | -123 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -50 |
| | | Upstream | -51 |
| | | Upstream | -54 |
| | | Upstream | -124 |
Matrix_406 | ATERF-7 | Not available | Upstream | -49 |
Matrix_409 | DEAR3 | Not available | Upstream | -50 |
Matrix_418 | KNAT6;KNAT2 | Not available | Upstream | -49 |
Matrix_448 | ATERF6 | Not available | Upstream | -50 |
Matrix_45 | DRN | Not available | Upstream | -51 |
| | | Upstream | -52 |
| | | Upstream | -55 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -50 |
Matrix_462 | ATERF-8 | Not available | Upstream | -49 |
| | | Upstream | -50 |
| | | Upstream | -53 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -51 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -50 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -52 |
Matrix_515 | ddf2;ATCBF3;CBF1;CBF4 | Not available | Upstream | -28 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -50 |
Matrix_68 | AtMYB77 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84 | Upstream | -44 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -56 |
Matrix_91 | CRF3 | Not available | Upstream | -51 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -45 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -55 |
Motif_353 | HEXAMERATH4 | hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | Upstream | -51 |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | Upstream | -30 |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | Upstream | -31 |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | Upstream | -31 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -174 |
| | | Upstream | -176 |