Matrix_101 | ERF5 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -186 |
| | | Upstream | -187 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -53 |
| | | Upstream | -54 |
| | | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -65 |
| | | Upstream | -66 |
| | | Upstream | -77 |
| | | Upstream | -78 |
| | | Upstream | -184 |
| | | Upstream | -185 |
| | | Upstream | -350 |
| | | Upstream | -353 |
Matrix_119 | RRTF1 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -175 |
Matrix_138 | RRTF1 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -175 |
Matrix_146 | ORA47 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -350 |
| | | Upstream | -351 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -61 |
| | | Upstream | -62 |
Matrix_151 | ASIL1 | Not available | Upstream | -363 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -62 |
Matrix_190 | ATERF1 | Not available | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_196 | TCP20;AT5G41030 | Not available | Upstream | -191 |
Matrix_224 | ERF1 | Not available | Upstream | -57 |
| | | Upstream | -58 |
| | | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
| | | Upstream | -67 |
| | | Upstream | -78 |
| | | Upstream | -79 |
| | | Upstream | -178 |
| | | Upstream | -349 |
| | | Upstream | -360 |
| | | Upstream | -361 |
Matrix_234 | RAP2.3 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -350 |
| | | Upstream | -351 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -62 |
| | | Upstream | -63 |
Matrix_249 | WRKY11 | Not available | Upstream | -160 |
Matrix_252 | RAP2.6 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -178 |
| | | Upstream | -179 |
| | | Upstream | -350 |
| | | Upstream | -351 |
Matrix_261 | ATERF-1 | Not available | Upstream | -61 |
| | | Upstream | -62 |
Matrix_272 | DEAR4 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -350 |
| | | Upstream | -351 |
Matrix_277 | RAP2.6 | Not available | Upstream | -75 |
| | | Upstream | -87 |
Matrix_287 | ERF2 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_288 | RAP2.3 | Not available | Upstream | -60 |
Matrix_295 | ERF1 | Not available | Upstream | -61 |
| | | Upstream | -62 |
Matrix_321 | HRD | Not available | Upstream | -61 |
| | | Upstream | -64 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -57 |
| | | Upstream | -58 |
| | | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
Matrix_334 | AT3G23230 | Not available | Upstream | -62 |
| | | Upstream | -63 |
| | | Upstream | -65 |
| | | Upstream | -66 |
Matrix_343 | AT2G33710 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -176 |
| | | Upstream | -350 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -61 |
Matrix_345 | POC1 | Not available | Upstream | -184 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -57 |
| | | Upstream | -58 |
| | | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
Matrix_360 | ORA59 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_363 | RAP2.3 | Not available | Upstream | -60 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -360 |
| | | Upstream | -361 |
Matrix_378 | ATERF1 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -350 |
Matrix_401 | MYB55 | Not available | Upstream | -178 |
Matrix_405 | DREB2C | Not available | Upstream | -62 |
| | | Upstream | -65 |
Matrix_406 | ATERF-7 | Not available | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -62 |
| | | Upstream | -63 |
Matrix_409 | DEAR3 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -178 |
| | | Upstream | -360 |
| | | Upstream | -361 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -62 |
| | | Upstream | -63 |
| | | Upstream | -65 |
| | | Upstream | -66 |
| | | Upstream | -177 |
Matrix_448 | ATERF6 | Not available | Upstream | -60 |
| | | Upstream | -63 |
Matrix_45 | DRN | Not available | Upstream | -61 |
| | | Upstream | -62 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -360 |
| | | Upstream | -361 |
Matrix_462 | ATERF-8 | Not available | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -62 |
| | | Upstream | -63 |
Matrix_47 | AtMYB77 | Not available | Upstream | -67 |
| | | Upstream | -79 |
Matrix_473 | RRTF1 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -350 |
| | | Upstream | -351 |
Matrix_482 | AT2G25650;AT4G00270 | Not available | Upstream | -51 |
Matrix_484 | ATERF13 | Not available | Upstream | -61 |
| | | Upstream | -62 |
Matrix_488 | ABF1 | Not available | Upstream | -180 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -64 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -59 |
| | | Upstream | -60 |
| | | Upstream | -62 |
| | | Upstream | -63 |
| | | Upstream | -65 |
| | | Upstream | -66 |
| | | Upstream | -177 |
Matrix_517 | ERF12 | Not available | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -350 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -52 |
| | | Upstream | -53 |
| | | Upstream | -57 |
| | | Upstream | -58 |
| | | Upstream | -60 |
| | | Upstream | -61 |
| | | Upstream | -63 |
| | | Upstream | -64 |
| | | Upstream | -66 |
| | | Upstream | -67 |
| | | Upstream | -78 |
| | | Upstream | -79 |
| | | Upstream | -175 |
| | | Upstream | -178 |
| | | Upstream | -360 |
| | | Upstream | -361 |
Matrix_68 | AtMYB77 | More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana. Plant J 14: 273-84 | Upstream | -67 |
| | | Upstream | -79 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -62 |
| | | Upstream | -63 |
Matrix_91 | CRF3 | Not available | Upstream | -58 |
| | | Upstream | -59 |
| | | Upstream | -61 |
| | | Upstream | -62 |
| | | Upstream | -64 |
| | | Upstream | -65 |
| | | Upstream | -176 |
Matrix_95 | LFY | Not available | Upstream | -357 |
Motif_104 | CAREOSREP1 | CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in rice | Upstream | -46 |
Motif_116 | INRNTPSADB | Inr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA box | Upstream | -97 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -18 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -18 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -18 |
| | | Upstream | -73 |
| | | Upstream | -85 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -62 |
| | | Upstream | -65 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -18 |
Motif_382 | CATATGGMSAUR | Sequence found in NDE element in soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness | Upstream | -1456 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -45 |
Motif_618 | MYB1AT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis | Upstream | -373 |
Motif_683 | AtMYB2 BS in RD22 | Binding site for MYB (ATMYB2) in dehydration-responsive gene, rd22; MYB binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -141 of rd22 gene; Also MYC at ca. -200 of rd22 gene; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression | Upstream | -373 |