Matrix_101 | ERF5 | Not available | Upstream | -870 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -868 |
Matrix_123 | FUSCA3 | Not available | Upstream | -1092 |
Matrix_146 | ORA47 | Not available | Upstream | -870 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -870 |
| | | Upstream | -871 |
Matrix_184 | AGL15 | Not available | Upstream | -948 |
Matrix_224 | ERF1 | Not available | Upstream | -869 |
Matrix_234 | RAP2.3 | Not available | Upstream | -870 |
Matrix_261 | ATERF-1 | Not available | Upstream | -870 |
Matrix_269 | FHY3/FAR1 | Not available | Upstream | -1729 |
Matrix_272 | DEAR4 | Not available | Upstream | -870 |
Matrix_287 | ERF2 | Not available | Upstream | -870 |
Matrix_288 | RAP2.3 | Not available | Upstream | -869 |
Matrix_295 | ERF1 | Not available | Upstream | -870 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -869 |
Matrix_334 | AT3G23230 | Not available | Upstream | -871 |
Matrix_343 | AT2G33710 | Not available | Upstream | -870 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -869 |
Matrix_360 | ORA59 | Not available | Upstream | -870 |
Matrix_363 | RAP2.3 | Not available | Upstream | -869 |
Matrix_372 | ANAC81 | DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virus | Upstream | -1704 |
| | | Upstream | -1713 |
Matrix_378 | ATERF1 | Not available | Upstream | -870 |
Matrix_406 | ATERF-7 | Not available | Upstream | -868 |
Matrix_409 | DEAR3 | Not available | Upstream | -869 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -871 |
Matrix_45 | DRN | Not available | Upstream | -870 |
| | | Upstream | -871 |
Matrix_462 | ATERF-8 | Not available | Upstream | -868 |
Matrix_48 | PI | Not available | Upstream | -1720 |
Matrix_484 | ATERF13 | Not available | Upstream | -870 |
| | | Upstream | -871 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -869 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -871 |
| | | Upstream | -872 |
Matrix_517 | ERF12 | Not available | Upstream | -870 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -869 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -871 |
Matrix_91 | CRF3 | Not available | Upstream | -870 |
Motif_127 | SBOXATRBCS | S-box conserved in several rbcS promoters in Arabidopsis; ABI4 binding site; Important for the sugar and ABA responsiveness of CMA5 | Upstream | -862 |
Motif_263 | RYREPEATVFLEB4;ABI3 | RY repeat motif; quantitative seed expression; Gene: Vicia faba LeB4; Soybean glycinin (Gy2); other dicot and monocot seed protein genes; Sph box found in rice Osem gene promoter; Binding site of Arabidopsis B3-domain-containing transcription factor FUS3; TRAB1, bZIP transcription factor, interacts with VP1 and mediates abscisic acid-induced transcritption; FUS3 protein physically interact with two RY elements present in the AtGA3ox promoter;RY repeats are conserved in the 5 prime-flanking region of legume seed protein genes. Gene regulation during late embryogenesis: the RY motif of maturation-specific gene promoters is a direct target of the FUS3 gene product | Upstream | -1095 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -871 |
Motif_453 | HEXMOTIFTAH3H4 | hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding site | Upstream | -498 |
Motif_490 | PROLAMINBOXOSGLUB1 | Prolamine box found in the rice GluB-1 gene promoter; Involved in quantitative regulation of the GluB-1 gene | Upstream | -215 |
Motif_518 | SPHCOREZMC1 | Core of Sph element; Core motif of Sph element in maize C1 gene to which maize VP1 (viviparous 1) protein binds; VP1-responsive element; see RYREPEAT4; VP1 gene is specifically required for expression of the maturation program in seed development; VP1 is a novel transcription factor possibly involved in potentiation of a seed-specific hormone response | Upstream | -1093 |
Motif_576 | TGACGTVMAMY | TGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seeds | Upstream | -498 |
Motif_649 | 2SSEEDPROTBANAPA | Conserved in many storage-protein gene promoters; May be important for high activity of the napA promoter | Upstream | -679 |
| | | Upstream | -1001 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -908 |
Motif_83 | CIACADIANLELHC | Region necessary for circadian expression of tomato Lhc gene | Upstream | -635 |
| | | Upstream | -820 |
Motif_98 | SEF3MOTIFGM | SEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4 | Upstream | -987 |