View conserved binding sites
- Gene
- SL12G010370
- Description
- Transcription factor (Fragment) (AHRD V1 ***- D6MKF6_9ASPA)
- Alias
- Solyc12g010370.1;Solyc12g010370.1;Solyc12g010370.1.1;Solyc12g010370.1.1
Binding site | Name | Description | Location | Position |
---|---|---|---|---|
Matrix_143 | GATA14;GATA6;GATA5 | Not available | Upstream | -263 |
Matrix_414 | AGL15 | Not available | Upstream | -172 |
Upstream | -174 | |||
Motif_136 | SEF4MOTIFGM7S | SEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4) | Upstream | -35 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -190 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -190 |