View conserved binding sites


Gene
SL11G020670
Description
TCP family transcription factor (AHRD V1 *-** A6MCZ2_9ORYZ)%3B contains Interpro domain(s) IPR005333 Transcription factor%2C TCP
Alias
Solyc11g020670.1;Solyc11g020670.1.1;Solyc11g020670.1.1;Solyc11g020670.1
Binding siteNameDescriptionLocationPosition
Matrix_269FHY3/FAR1Not availableUpstream-241
Upstream-242
Matrix_370WRKY50;WRKY51Not availableUpstream-217
Matrix_48PINot availableUpstream-5
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-457
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-223
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-250
Motif_346SND1;VND6;VND7;NST1;NST2Global analysis of direct targets of secondary wall NAC master switches in ArabidopsisUpstream-227
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-1764
Upstream-1765
Upstream-1766
Upstream-1767
Upstream-1768
Upstream-1769
Upstream-1770
Upstream-1771
Upstream-1772
Upstream-1773