View conserved binding sites


Gene
SL09G074200
Description
Baculoviral IAP repeat-containing 3 (AHRD V1 *--- Q5XIW4_RAT)%3B contains Interpro domain(s) IPR001841 Zinc finger%2C RING-type
Alias
Solyc09g074200.1.1;Solyc09g074200.1.1;Solyc09g074200.1;Solyc09g074200.1
Binding siteNameDescriptionLocationPosition
Matrix_455MYB111Not availableUpstream-1774
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-1773
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-522
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-1773