PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: SL09G063010
Description: BHLH transcription factor (AHRD V1 *-** B6TXR4_MAIZE)%3B contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Alias: Solyc09g063010.2;Solyc09g063010.2.1;Solyc09g063010.2;Solyc09g063010.2.1

Binding site	Name	Description	Location	Position
Matrix_113	ABI5	Not available	Intron	1271
			Intron	1269
Matrix_122	ABF1;AREB2	Not available	Intron	1271
			Intron	1270
Matrix_129	ABF1	Not available	Intron	1270
Matrix_145	GBF4;AT5G44080	Not available	Intron	1269
Matrix_15	PIF3_1	Direct targeting of light signals to a promoter element-bound transcription factor	Intron	1274
			Intron	1232
Matrix_156	POC1	Not available	Intron	1271
Matrix_172	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	Upstream	-382
Matrix_192	FHY3/FAR1	Not available	Intron	1273
			Intron	1269
Matrix_194	HYH;HY5	Not available	Intron	1273
Matrix_214	AP1	Not available	Intron	1272
Matrix_217	BES1	A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana	Intron	1273
Matrix_264	ATAREB1	Not available	Intron	1273
			Intron	1270
Matrix_300	bZIP68;bZIP16	Not available	Intron	1270
			Intron	1269
			Intron	1228
Matrix_301	PIL5	Not available	Intron	2835
			Intron	1269
Matrix_332	SPT;ALC	Not available	Intron	1270
Matrix_338	AP2	Not available	Intron	1273
Matrix_356	PRR5	Not available	Intron	1277
			Intron	1273
Matrix_359	FLC	Not available	Intron	1272
Matrix_389	ILR3	Not available	Intron	1270
Matrix_403	BZR1	Not available	Intron	1272
Matrix_409	DEAR3	Not available	Upstream	-114
Matrix_443	AGL15	Not available	Intron	1272
Matrix_48	PI	Not available	Upstream	-316
			Upstream	-401
			Upstream	-402
Matrix_53	MYC3	Not available	Intron	1272
Matrix_55	PIF3	Not available	Intron	1271
Matrix_7	PIF4	Not available	Intron	1270
Motif_168	IBOX	I box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene	Upstream	-384
			Upstream	-547
Motif_181	IBOXCORENT	I-box core motif in the CAMs (conserved DNA modular arrays) associated with light-responsive promoter regions	Upstream	-384
Motif_279	POLASIG3	Plant polyA signal; Consensus sequence for plant polyadenylation signal	Downstream	9873
Motif_285	HDZIP2ATATHB2	Binding site of the Arabidopsis homeobox gene (ATHB-2) found in its own promoter; Located between -72 and -80; Similar to the HD-ZIP-2 binding consensus sequence; ATHB-2 is regulated by light signals which function as a negative autoregulator of its own gene	Downstream	9874
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Upstream	-405
			Upstream	-407