View conserved binding sites


Gene
SL06G073330
Description
Lysyl-tRNA synthetase (AHRD V1 **** B9SY11_RICCO)%3B contains Interpro domain(s) IPR002313 Lysyl-tRNA synthetase%2C class II
Alias
Solyc06g073330.2.1;Solyc06g073330.2;Solyc06g073330.2;Solyc06g073330.2.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-4
Upstream-7
Matrix_110ATABI4;AT3G57600Not availableUpstream-5
Upstream-6
Matrix_119RRTF1Not availableUpstream-3
Upstream-6
Matrix_138RRTF1Not availableUpstream-3
Upstream-6
Matrix_146ORA47Not availableUpstream-7
Matrix_147ERF3;AT1G80580Not availableUpstream-4
Upstream-5
Upstream-7
Upstream-8
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-5
Matrix_190ATERF1Not availableUpstream-5
Upstream-7
Upstream-8
Matrix_224ERF1Not availableUpstream-3
Upstream-4
Upstream-6
Upstream-7
Matrix_234RAP2.3Not availableUpstream-4
Upstream-7
Matrix_243RAP2.12;RAP2.2Not availableUpstream-8
Matrix_252RAP2.6Not availableUpstream-4
Upstream-7
Matrix_261ATERF-1Not availableUpstream-4
Upstream-7
Matrix_272DEAR4Not availableUpstream-7
Matrix_287ERF2Not availableUpstream-4
Upstream-7
Matrix_288RAP2.3Not availableUpstream-3
Upstream-6
Matrix_295ERF1Not availableUpstream-7
Matrix_321HRDNot availableUpstream-7
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-3
Upstream-6
Matrix_334AT3G23230Not availableUpstream-5
Upstream-8
Matrix_343AT2G33710Not availableUpstream-4
Upstream-7
Matrix_344ATERF15;AT4G18450Not availableUpstream-7
Matrix_355ERF10;ERF11Not availableUpstream-3
Upstream-6
Matrix_360ORA59Not availableUpstream-7
Upstream-8
Matrix_363RAP2.3Not availableUpstream-6
Matrix_374AT5G07580;AT5G61590Not availableUpstream-7
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-4
Upstream-7
Matrix_378ATERF1Not availableUpstream-4
Upstream-7
Matrix_394DREB_UNot availableUpstream-3
Matrix_396AP3Not availableUpstream-101
Upstream-102
Matrix_405DREB2CNot availableUpstream-8
Matrix_406ATERF-7Not availableUpstream-5
Matrix_409DEAR3Not availableUpstream-6
Upstream-7
Matrix_418KNAT6;KNAT2Not availableUpstream-3
Matrix_426CRF1;CRF2Not availableUpstream-5
Upstream-8
Matrix_448ATERF6Not availableUpstream-3
Matrix_45DRNNot availableUpstream-4
Upstream-5
Upstream-7
Upstream-8
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-3
Matrix_462ATERF-8Not availableUpstream-5
Matrix_473RRTF1Not availableUpstream-4
Upstream-7
Matrix_484ATERF13Not availableUpstream-7
Upstream-8
Matrix_493AT1G22985;AT1G71130Not availableUpstream-4
Upstream-7
Matrix_5AT5G51190;ERF104Not availableUpstream-7
Matrix_50ATERF14;AT5G43410Not availableUpstream-3
Upstream-6
Matrix_506DRNL;ATERF-4Not availableUpstream-5
Upstream-8
Matrix_517ERF12Not availableUpstream-7
Upstream-8
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-6
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-5
Upstream-8
Matrix_91CRF3Not availableUpstream-4
Upstream-7
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-8
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-103