View conserved binding sites


Gene
SL06G066680
Description
Mitochondrial carrier protein (AHRD V1 ***- D2VIZ2_NAEGR)%3B contains Interpro domain(s) IPR002067 Mitochondrial carrier protein
Alias
Solyc06g066680.2.1;Solyc06g066680.2.1;Solyc06g066680.2;Solyc06g066680.2
Binding siteNameDescriptionLocationPosition
Matrix_191PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-1553
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-53
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-645
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-53
Upstream-55
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-1398
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-1398
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-53
Upstream-55
Upstream-57
Upstream-59
Upstream-61
Upstream-63