Matrix_101 | ERF5 | Not available | Upstream | -1594 |
| | | Upstream | -1596 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -1591 |
Matrix_146 | ORA47 | Not available | Upstream | -1594 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_151 | ASIL1 | Not available | Upstream | -1587 |
| | | Upstream | -1588 |
| | | Upstream | -1595 |
| | | Upstream | -1596 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -1595 |
| | | Upstream | -1596 |
| | | Upstream | -1597 |
| | | Upstream | -1598 |
Matrix_190 | ATERF1 | Not available | Upstream | -1594 |
Matrix_234 | RAP2.3 | Not available | Upstream | -1594 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -1595 |
Matrix_252 | RAP2.6 | Not available | Upstream | -1594 |
| | | Upstream | -1595 |
Matrix_261 | ATERF-1 | Not available | Upstream | -1595 |
Matrix_269 | FHY3/FAR1 | Not available | Upstream | -1482 |
Matrix_272 | DEAR4 | Not available | Upstream | -1594 |
Matrix_287 | ERF2 | Not available | Upstream | -1594 |
| | | Upstream | -1596 |
Matrix_288 | RAP2.3 | Not available | Upstream | -1595 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -1595 |
Matrix_334 | AT3G23230 | Not available | Upstream | -1595 |
Matrix_343 | AT2G33710 | Not available | Upstream | -1594 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -1595 |
Matrix_360 | ORA59 | Not available | Upstream | -1596 |
Matrix_363 | RAP2.3 | Not available | Upstream | -1595 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -1595 |
| | | Upstream | -1596 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -1595 |
Matrix_378 | ATERF1 | Not available | Upstream | -1594 |
Matrix_406 | ATERF-7 | Not available | Upstream | -1594 |
| | | Upstream | -1595 |
| | | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_409 | DEAR3 | Not available | Upstream | -1595 |
Matrix_433 | ATERF1 | Not available | Upstream | -1595 |
Matrix_448 | ATERF6 | Not available | Upstream | -1595 |
| | | Upstream | -1596 |
Matrix_45 | DRN | Not available | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -1595 |
Matrix_462 | ATERF-8 | Not available | Upstream | -1594 |
| | | Upstream | -1595 |
| | | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_473 | RRTF1 | Not available | Upstream | -1594 |
Matrix_484 | ATERF13 | Not available | Upstream | -1596 |
Matrix_49 | FHY3/FAR1 | Not available | Upstream | -1590 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -1595 |
| | | Upstream | -1596 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -1596 |
| | | Upstream | -1597 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -1595 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -1595 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -1595 |
Matrix_59 | AT4G00238;AT4G00250 | Not available | Upstream | -1595 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -1595 |
Matrix_91 | CRF3 | Not available | Upstream | -1595 |
Motif_210 | REBETALGLHCB21 | REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulation | Downstream | 3825 |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -1539 |
| | | Upstream | -1612 |
Motif_410 | ANAERO1CONSENSUS | One of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curator | Upstream | -143 |
| | | Upstream | -361 |
Motif_563 | PYRIMIDINEBOXOSRAMY1A | Pyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this site | Downstream | 3840 |
| | | Upstream | -1655 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -1613 |
| | | Upstream | -1651 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -1651 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -1618 |