View conserved binding sites


Gene
SL06G061190
Description
Hydroxyproline-rich glycoprotein family protein (AHRD V1 *-*- D7KHM1_ARALY)%3B contains Interpro domain(s) IPR008889 VQ
Alias
Solyc06g061190.1.1;Solyc06g061190.1.1;Solyc06g061190.1;Solyc06g061190.1
Binding siteNameDescriptionLocationPosition
Matrix_148WRKY60Not availableUpstream-736
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-717
Matrix_197NAPNot availableUpstream-737
Upstream-738
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-737
Matrix_220WRKY18Not availableUpstream-736
Matrix_235WRKY67;WRKY64;WRKY63;WRKY66Not availableUpstream-737
Matrix_263WRKY33;WRKY19;WRKY32Not availableUpstream-736
Matrix_275ZAP1Characterization of a zinc-dependent transcriptional activator from ArabidopsisUpstream-735
Matrix_289WRKY25Not availableUpstream-737
Matrix_3WRKY48Not availableUpstream-736
Matrix_325WRKY4;WRKY3;WRKY58;ATWRKY34;WRKY20;ATWRKY2Not availableUpstream-737
Matrix_368ATWRKY56;WRKY45;WRKY75;WRKY24Not availableUpstream-737
Matrix_370WRKY50;WRKY51Not availableUpstream-736
Upstream-737
Matrix_415WRKY27Not availableUpstream-737
Matrix_470WRKY18Not availableUpstream-736
Matrix_504WRKY40Not availableUpstream-737
Matrix_75WRKY29Not availableUpstream-736
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-720
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-748
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-721
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-738
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-855
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-734
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-742
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightUpstream-716
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-735
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-721
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-735
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-735
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-727