View conserved binding sites


Gene
SL05G012110
Description
6-phosphogluconolactonase (AHRD V1 **** Q156I4_MANIN)%3B contains Interpro domain(s) IPR005900 6-phosphogluconolactonase
Alias
Solyc05g012110.2.1;Solyc05g012110.2;Solyc05g012110.2.1;Solyc05g012110.2
Binding siteNameDescriptionLocationPosition
Matrix_184AGL15Not availableUpstream-202
Upstream-205
Upstream-208
Upstream-211
Upstream-214
Matrix_25AP3Not availableUpstream-1136
Motif_155NODCON1GMOne of two putative nodulin consensus sequences; See also NODCON2GM; One of the consensus sequence motifs of organ-specific elements (OSE) characteristic of the promoters activated in infected cells of root nodulesUpstream-1671
Upstream-1677
Motif_165AP3SV40AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2Upstream-1369
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-1675
Motif_476XYLATcis-element identified among the promoters of the core xylem gene setUpstream-1070
Motif_606NAPINMOTIFBNSequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seedsUpstream-1146
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-533
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-1674