View conserved binding sites


Gene
SL05G009560
Description
Homologous-pairing protein 2 homolog (AHRD V1 ***- C3KHP4_ANOFI)%3B contains Interpro domain(s) IPR010776 Tat binding protein 1-interacting
Alias
Solyc05g009560.2.1;Solyc05g009560.2;Solyc05g009560.2;Solyc05g009560.2.1
Binding siteNameDescriptionLocationPosition
Motif_226E2F1OSPCNAre2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-22
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-280
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-20
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-22
Motif_593E2Fb;E2Fc;E2Fd;E2Ff;E2Fe;E2FaThe E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plants. Arabidopsis E2F1 binds a sequence present in the promoter of S-phase-regulated gene AtCDC6 and is a member of a multigene family with differential activitiesUpstream-21
Motif_663E2F binding site motif;E2F/DP BS in AtCDC6Not availableUpstream-22