View conserved binding sites


Gene
SL03G114810
Description
Glycosyltransferase (AHRD V1 ***- B9N4D7_POPTR)%3B contains Interpro domain(s) IPR002495 Glycosyl transferase%2C family 8
Alias
Solyc03g114810.2;Solyc03g114810.2;Solyc03g114810.2.1;Solyc03g114810.2.1
Binding siteNameDescriptionLocationPosition
Matrix_140ATHB5DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitroDownstream4165
Matrix_362DEAR3Not availableUpstream-561
Matrix_4ARR14Not availableUpstream-51
Matrix_431ATHB21;HB-3Not availableDownstream4165
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-62
Motif_165AP3SV40AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2Upstream-68
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalDownstream4354
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-10
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-27
Motif_562-300CORETGTAAAG core motif in -300 elements of alpha-zein genes of maize; -300 element core; prolamin box; P-box; Binds with P-box binding factor (PBF); Binds with BPBF (Barley PBF); PBF is a DNA-binding protein of the DOF class of transcription factorsUpstream-383
Motif_610GATA-2;GATA-4;GATA-3;GATA-1Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-66
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-561
Upstream-699
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-9