Matrix_101 | ERF5 | Not available | Upstream | -99 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -101 |
Matrix_119 | RRTF1 | Not available | Upstream | -103 |
Matrix_138 | RRTF1 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_146 | ORA47 | Not available | Upstream | -99 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -99 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -110 |
Matrix_190 | ATERF1 | Not available | Upstream | -101 |
Matrix_224 | ERF1 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_234 | RAP2.3 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -98 |
Matrix_252 | RAP2.6 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_256 | IXR11;KNAT5;KNAT4;KNAT3 | Not available | Upstream | -201 |
Matrix_261 | ATERF-1 | Not available | Upstream | -99 |
Matrix_272 | DEAR4 | Not available | Upstream | -99 |
Matrix_277 | RAP2.6 | Not available | Upstream | -103 |
Matrix_287 | ERF2 | Not available | Upstream | -99 |
Matrix_288 | RAP2.3 | Not available | Upstream | -100 |
Matrix_295 | ERF1 | Not available | Upstream | -99 |
Matrix_298 | RAV1 | Not available | Upstream | -31 |
Matrix_305 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -77 |
Matrix_321 | HRD | Not available | Upstream | -99 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_334 | AT3G23230 | Not available | Upstream | -98 |
Matrix_343 | AT2G33710 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_344 | ATERF15;AT4G18450 | Not available | Upstream | -99 |
Matrix_345 | POC1 | Not available | Upstream | -79 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_36 | RAV1_1 | RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants | Upstream | -31 |
Matrix_360 | ORA59 | Not available | Upstream | -99 |
Matrix_363 | RAP2.3 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -100 |
| | | Upstream | -99 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -99 |
Matrix_378 | ATERF1 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_38 | SPL14 | Not available | Upstream | -78 |
Matrix_405 | DREB2C | Not available | Upstream | -101 |
Matrix_406 | ATERF-7 | Not available | Upstream | -104 |
| | | Upstream | -101 |
Matrix_409 | DEAR3 | Not available | Upstream | -100 |
Matrix_413 | RAV1 | Not available | Upstream | -31 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -101 |
| | | Upstream | -98 |
Matrix_448 | ATERF6 | Not available | Upstream | -100 |
Matrix_45 | DRN | Not available | Upstream | -99 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -100 |
Matrix_462 | ATERF-8 | Not available | Upstream | -104 |
| | | Upstream | -101 |
Matrix_47 | AtMYB77 | Not available | Upstream | -82 |
Matrix_473 | RRTF1 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_484 | ATERF13 | Not available | Upstream | -99 |
Matrix_488 | ABF1 | Not available | Upstream | -83 |
Matrix_489 | RAV1 | Not available | Upstream | -29 |
Matrix_490 | AtMYB77;ATMYB44 | Not available | Upstream | -107 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -99 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -100 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -101 |
| | | Upstream | -98 |
Matrix_517 | ERF12 | Not available | Upstream | -99 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -103 |
| | | Upstream | -100 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -101 |
| | | Upstream | -98 |
Matrix_91 | CRF3 | Not available | Upstream | -102 |
| | | Upstream | -99 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -84 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -72 |
Motif_193 | GLK1 | GLK transcription factors coordinate expression of the photosynthetic apparatus in Arabidopsis | Upstream | -92 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -105 |
| | | Upstream | -72 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -98 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -72 |
Motif_391 | REALPHALGLHCB21 | REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation | Upstream | -90 |
Motif_392 | PALBOXAPC | Box A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box L | Upstream | -78 |
Motif_618 | MYB1AT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis | Upstream | -89 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -33 |
Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -33 |