| Matrix_171 | LBD3;LBD4 | Not available | Upstream | -118 |
| Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -118 |
| Matrix_341 | HMGA | Not available | Upstream | -123 |
| Matrix_4 | ARR14 | Not available | Upstream | -22 |
| Matrix_84 | AtGRF6 | Not available | Upstream | -119 |
| Motif_450 | E2FCONSENSUS | E2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plants | Upstream | -122 |
| Motif_462 | TE2F2NTPCNA | te2f-2 found in the promoter of tobacco PCNA gene; Located between -84 and -77; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissue | Upstream | -122 |
| Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -129 |
| Motif_682 | GT1GMSCAM4 | GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expression | Upstream | -129 |
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