View conserved binding sites


Gene
SL02G038760
Description
AT-hook motif nuclear localized protein 2 (AHRD V1 ***- A1A6F0_ORYSJ)%3B contains Interpro domain(s) IPR005175 Protein of unknown function DUF296
Alias
Solyc02g038760.2;Solyc02g038760.2;Solyc02g038760.2.1;Solyc02g038760.2.1
Binding siteNameDescriptionLocationPosition
Matrix_132SOC1Not availableUpstream-1983
Matrix_396AP3Not availableUpstream-115
Motif_243TELOBOXATEEF1AA1telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristemsUpstream-114
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesDownstream4509
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-113