Matrix_48 | PI | Not available | Upstream | -62 |
Motif_129 | GAGAGMGSA1 | GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA | Intron | 2819 |
Motif_13 | E2F-varient binding site motif | A genome-wide identification of E2F-regulated genes in Arabidopsis | Upstream | -59 |
Motif_372 | E2FAT | E2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expression | Upstream | -59 |
Motif_441 | GAGA8HVBKN3 | GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR | Intron | 2819 |
| | | Intron | 2817 |
Motif_603 | SITEIIATCYTC | Site II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and rice | Upstream | -143 |
| | | Upstream | -216 |
| | | Upstream | -221 |
| | | Upstream | -259 |
| | | Upstream | -283 |
| | | Upstream | -327 |
| | | Upstream | -345 |
| | | Upstream | -368 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Intron | 2820 |
| | | Intron | 2818 |
| | | Intron | 2816 |
| | | Intron | 2814 |
| | | Intron | 2812 |
| | | Intron | 2810 |