View conserved binding sites


Gene
SL01G008160
Description
Tetratricopeptide repeat-containing protein (AHRD V1 ***- D7L8H9_ARALY)%3B contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Alias
Solyc01g008160.2.1;Solyc01g008160.2.1;Solyc01g008160.2;Solyc01g008160.2
Binding siteNameDescriptionLocationPosition
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-719
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-720
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteUpstream-130
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-124
Upstream-720